Actual source code: ex2.c
1: static char help[] = "Runaway electron model with Landau collision operator\n\n";
3: #include <petscdmplex.h>
4: #include <petsclandau.h>
5: #include <petscts.h>
6: #include <petscds.h>
7: #include <petscdmcomposite.h>
8: #include <petsc/private/petscimpl.h>
10: #if defined(PETSC_HAVE_CUDA_NVTX)
11: #include <nvToolsExt.h>
12: #endif
14: /* data for runaway electron model */
15: typedef struct REctx_struct {
16: PetscErrorCode (*test)(TS, Vec, PetscInt, PetscReal, PetscBool, LandauCtx *, struct REctx_struct *);
17: PetscErrorCode (*impuritySrcRate)(PetscReal, PetscReal *, LandauCtx *);
18: PetscErrorCode (*E)(Vec, Vec, PetscInt, PetscReal, LandauCtx *, PetscReal *);
19: PetscReal T_cold; /* temperature of newly ionized electrons and impurity ions */
20: PetscReal ion_potential; /* ionization potential of impurity */
21: PetscReal Ne_ion; /* effective number of electrons shed in ioization of impurity */
22: PetscReal Ez_initial;
23: PetscReal L; /* inductance */
24: Vec X_0;
25: PetscInt imp_idx; /* index for impurity ionizing sink */
26: PetscReal pulse_start;
27: PetscReal pulse_width;
28: PetscReal pulse_rate;
29: PetscReal current_rate;
30: PetscInt plotIdx;
31: PetscInt plotStep;
32: PetscInt idx; /* cache */
33: PetscReal j; /* cache */
34: PetscReal plotDt;
35: PetscBool plotting;
36: PetscBool use_spitzer_eta;
37: PetscInt print_period;
38: PetscInt grid_view_idx;
39: } REctx;
41: static const PetscReal kev_joul = 6.241506479963235e+15; /* 1/1000e */
43: #define RE_CUT 3.
44: /* < v, u_re * v * q > */
45: static void f0_j_re(PetscInt dim, PetscInt Nf, PetscInt NfAux, const PetscInt uOff[], const PetscInt uOff_x[], const PetscScalar u[], const PetscScalar u_t[], const PetscScalar u_x[], const PetscInt aOff[], const PetscInt aOff_x[], const PetscScalar a[], const PetscScalar a_t[], const PetscScalar a_x[], PetscReal t, const PetscReal x[], PetscInt numConstants, const PetscScalar constants[], PetscScalar *f0)
46: {
47: PetscReal n_e = PetscRealPart(u[0]);
48: if (dim == 2) {
49: if (x[1] > RE_CUT || x[1] < -RE_CUT) { /* simply a cutoff for REs. v_|| > 3 v(T_e) */
50: *f0 = n_e * 2. * PETSC_PI * x[0] * x[1] * constants[0]; /* n * r * v_|| * q */
51: } else {
52: *f0 = 0;
53: }
54: } else {
55: if (x[2] > RE_CUT || x[2] < -RE_CUT) { /* simply a cutoff for REs. v_|| > 3 v(T_e) */
56: *f0 = n_e * x[2] * constants[0];
57: } else {
58: *f0 = 0;
59: }
60: }
61: }
63: /* sum < v, u*v*q > */
64: static void f0_jz_sum(PetscInt dim, PetscInt Nf, PetscInt NfAux, const PetscInt uOff[], const PetscInt uOff_x[], const PetscScalar u[], const PetscScalar u_t[], const PetscScalar u_x[], const PetscInt aOff[], const PetscInt aOff_x[], const PetscScalar a[], const PetscScalar a_t[], const PetscScalar a_x[], PetscReal t, const PetscReal x[], PetscInt numConstants, const PetscScalar q[], PetscScalar *f0)
65: {
66: PetscInt ii;
67: f0[0] = 0;
68: if (dim == 2) {
69: for (ii = 0; ii < Nf; ii++) f0[0] += u[ii] * 2. * PETSC_PI * x[0] * x[1] * q[ii]; /* n * r * v_|| * q * v_0 */
70: } else {
71: for (ii = 0; ii < Nf; ii++) f0[0] += u[ii] * x[2] * q[ii]; /* n * v_|| * q * v_0 */
72: }
73: }
75: /* < v, n_e > */
76: static void f0_n(PetscInt dim, PetscInt Nf, PetscInt NfAux, const PetscInt uOff[], const PetscInt uOff_x[], const PetscScalar u[], const PetscScalar u_t[], const PetscScalar u_x[], const PetscInt aOff[], const PetscInt aOff_x[], const PetscScalar a[], const PetscScalar a_t[], const PetscScalar a_x[], PetscReal t, const PetscReal x[], PetscInt numConstants, const PetscScalar constants[], PetscScalar *f0)
77: {
78: PetscInt ii = (PetscInt)PetscRealPart(constants[0]);
79: if (dim == 2) f0[0] = 2. * PETSC_PI * x[0] * u[ii];
80: else f0[0] = u[ii];
81: }
83: /* < v, n_e v_|| > */
84: static void f0_vz(PetscInt dim, PetscInt Nf, PetscInt NfAux, const PetscInt uOff[], const PetscInt uOff_x[], const PetscScalar u[], const PetscScalar u_t[], const PetscScalar u_x[], const PetscInt aOff[], const PetscInt aOff_x[], const PetscScalar a[], const PetscScalar a_t[], const PetscScalar a_x[], PetscReal t, const PetscReal x[], PetscInt numConstants, const PetscScalar constants[], PetscScalar *f0)
85: {
86: PetscInt ii = (PetscInt)PetscRealPart(constants[0]);
87: if (dim == 2) f0[0] = u[ii] * 2. * PETSC_PI * x[0] * x[1]; /* n r v_|| */
88: else f0[0] = u[ii] * x[2]; /* n v_|| */
89: }
91: /* < v, n_e (v-shift) > */
92: static void f0_ve_shift(PetscInt dim, PetscInt Nf, PetscInt NfAux, const PetscInt uOff[], const PetscInt uOff_x[], const PetscScalar u[], const PetscScalar u_t[], const PetscScalar u_x[], const PetscInt aOff[], const PetscInt aOff_x[], const PetscScalar a[], const PetscScalar a_t[], const PetscScalar a_x[], PetscReal t, const PetscReal x[], PetscInt numConstants, const PetscScalar constants[], PetscScalar *f0)
93: {
94: PetscReal vz = numConstants > 0 ? PetscRealPart(constants[0]) : 0;
95: if (dim == 2) *f0 = u[0] * 2. * PETSC_PI * x[0] * PetscSqrtReal(x[0] * x[0] + (x[1] - vz) * (x[1] - vz)); /* n r v */
96: else {
97: *f0 = u[0] * PetscSqrtReal(x[0] * x[0] + x[1] * x[1] + (x[2] - vz) * (x[2] - vz)); /* n v */
98: }
99: }
101: /* CalculateE - Calculate the electric field */
102: /* T -- Electron temperature */
103: /* n -- Electron density */
104: /* lnLambda -- */
105: /* eps0 -- */
106: /* E -- output E, input \hat E */
107: static PetscReal CalculateE(PetscReal Tev, PetscReal n, PetscReal lnLambda, PetscReal eps0, PetscReal *E)
108: {
109: PetscReal c, e, m;
111: PetscFunctionBegin;
112: c = 299792458.0;
113: e = 1.602176e-19;
114: m = 9.10938e-31;
115: if (1) {
116: double Ec, Ehat = *E, betath = PetscSqrtReal(2 * Tev * e / (m * c * c)), j0 = Ehat * 7 / (PetscSqrtReal(2) * 2) * PetscPowReal(betath, 3) * n * e * c;
117: Ec = n * lnLambda * PetscPowReal(e, 3) / (4 * PETSC_PI * PetscPowReal(eps0, 2) * m * c * c);
118: *E = Ec;
119: PetscCall(PetscPrintf(PETSC_COMM_WORLD, "CalculateE j0=%g Ec = %g\n", j0, Ec));
120: } else {
121: PetscReal Ed, vth;
122: vth = PetscSqrtReal(8 * Tev * e / (m * PETSC_PI));
123: Ed = n * lnLambda * PetscPowReal(e, 3) / (4 * PETSC_PI * PetscPowReal(eps0, 2) * m * vth * vth);
124: *E = Ed;
125: }
126: PetscFunctionReturn(PETSC_SUCCESS);
127: }
129: static PetscReal Spitzer(PetscReal m_e, PetscReal e, PetscReal Z, PetscReal epsilon0, PetscReal lnLam, PetscReal kTe_joules)
130: {
131: PetscReal Fz = (1 + 1.198 * Z + 0.222 * Z * Z) / (1 + 2.966 * Z + 0.753 * Z * Z), eta;
132: eta = Fz * 4. / 3. * PetscSqrtReal(2. * PETSC_PI) * Z * PetscSqrtReal(m_e) * PetscSqr(e) * lnLam * PetscPowReal(4 * PETSC_PI * epsilon0, -2.) * PetscPowReal(kTe_joules, -1.5);
133: return eta;
134: }
136: /* */
137: static PetscErrorCode testNone(TS ts, Vec X, PetscInt stepi, PetscReal time, PetscBool islast, LandauCtx *ctx, REctx *rectx)
138: {
139: PetscFunctionBeginUser;
140: PetscFunctionReturn(PETSC_SUCCESS);
141: }
143: /* */
144: static PetscErrorCode testSpitzer(TS ts, Vec X, PetscInt stepi, PetscReal time, PetscBool islast, LandauCtx *ctx, REctx *rectx)
145: {
146: PetscInt ii, nDMs;
147: PetscDS prob;
148: static PetscReal old_ratio = 1e10;
149: TSConvergedReason reason;
150: PetscReal J, J_re, spit_eta, Te_kev = 0, E, ratio, Z, n_e, v, v2;
151: PetscScalar user[2] = {0., ctx->charges[0]}, q[LANDAU_MAX_SPECIES], tt[LANDAU_MAX_SPECIES], vz;
152: PetscReal dt;
153: DM pack, plexe = ctx->plex[0], plexi = (ctx->num_grids == 1) ? NULL : ctx->plex[1];
154: Vec *XsubArray;
156: PetscFunctionBeginUser;
157: PetscCheck(ctx->num_species == 2, PETSC_COMM_SELF, PETSC_ERR_PLIB, "ctx->num_species %" PetscInt_FMT " != 2", ctx->num_species);
158: PetscCall(VecGetDM(X, &pack));
159: PetscCheck(pack, PETSC_COMM_SELF, PETSC_ERR_PLIB, "no DM");
160: PetscCall(DMCompositeGetNumberDM(pack, &nDMs));
161: PetscCheck(nDMs == ctx->num_grids * ctx->batch_sz, PETSC_COMM_SELF, PETSC_ERR_PLIB, "nDMs != ctx->num_grids*ctx->batch_sz %" PetscInt_FMT " != %" PetscInt_FMT, nDMs, ctx->num_grids * ctx->batch_sz);
162: PetscCall(PetscMalloc(sizeof(*XsubArray) * nDMs, &XsubArray));
163: PetscCall(DMCompositeGetAccessArray(pack, X, nDMs, NULL, XsubArray)); // read only
164: PetscCall(TSGetTimeStep(ts, &dt));
165: /* get current for each grid */
166: for (ii = 0; ii < ctx->num_species; ii++) q[ii] = ctx->charges[ii];
167: PetscCall(DMGetDS(plexe, &prob));
168: PetscCall(PetscDSSetConstants(prob, 2, &q[0]));
169: PetscCall(PetscDSSetObjective(prob, 0, &f0_jz_sum));
170: PetscCall(DMPlexComputeIntegralFEM(plexe, XsubArray[LAND_PACK_IDX(ctx->batch_view_idx, 0)], tt, NULL));
171: J = -ctx->n_0 * ctx->v_0 * PetscRealPart(tt[0]);
172: if (plexi) { // add first (only) ion
173: PetscCall(DMGetDS(plexi, &prob));
174: PetscCall(PetscDSSetConstants(prob, 1, &q[1]));
175: PetscCall(PetscDSSetObjective(prob, 0, &f0_jz_sum));
176: PetscCall(DMPlexComputeIntegralFEM(plexi, XsubArray[LAND_PACK_IDX(ctx->batch_view_idx, 1)], tt, NULL));
177: J += -ctx->n_0 * ctx->v_0 * PetscRealPart(tt[0]);
178: }
179: /* get N_e */
180: PetscCall(DMGetDS(plexe, &prob));
181: PetscCall(PetscDSSetConstants(prob, 1, user));
182: PetscCall(PetscDSSetObjective(prob, 0, &f0_n));
183: PetscCall(DMPlexComputeIntegralFEM(plexe, XsubArray[LAND_PACK_IDX(ctx->batch_view_idx, 0)], tt, NULL));
184: n_e = PetscRealPart(tt[0]) * ctx->n_0;
185: /* Z */
186: Z = -ctx->charges[1] / ctx->charges[0];
187: /* remove drift */
188: if (0) {
189: user[0] = 0; // electrons
190: PetscCall(DMGetDS(plexe, &prob));
191: PetscCall(PetscDSSetConstants(prob, 1, user));
192: PetscCall(PetscDSSetObjective(prob, 0, &f0_vz));
193: PetscCall(DMPlexComputeIntegralFEM(plexe, XsubArray[LAND_PACK_IDX(ctx->batch_view_idx, 0)], tt, NULL));
194: vz = ctx->n_0 * PetscRealPart(tt[0]) / n_e; /* non-dimensional */
195: } else vz = 0;
196: /* thermal velocity */
197: PetscCall(DMGetDS(plexe, &prob));
198: PetscCall(PetscDSSetConstants(prob, 1, &vz));
199: PetscCall(PetscDSSetObjective(prob, 0, &f0_ve_shift));
200: PetscCall(DMPlexComputeIntegralFEM(plexe, XsubArray[LAND_PACK_IDX(ctx->batch_view_idx, 0)], tt, NULL));
201: v = ctx->n_0 * ctx->v_0 * PetscRealPart(tt[0]) / n_e; /* remove number density to get velocity */
202: v2 = PetscSqr(v); /* use real space: m^2 / s^2 */
203: Te_kev = (v2 * ctx->masses[0] * PETSC_PI / 8) * kev_joul; /* temperature in kev */
204: spit_eta = Spitzer(ctx->masses[0], -ctx->charges[0], Z, ctx->epsilon0, ctx->lambdas[0][1], Te_kev / kev_joul); /* kev --> J (kT) */
205: if (0) {
206: PetscCall(DMGetDS(plexe, &prob));
207: PetscCall(PetscDSSetConstants(prob, 1, q));
208: PetscCall(PetscDSSetObjective(prob, 0, &f0_j_re));
209: PetscCall(DMPlexComputeIntegralFEM(plexe, XsubArray[LAND_PACK_IDX(ctx->batch_view_idx, 0)], tt, NULL));
210: } else tt[0] = 0;
211: J_re = -ctx->n_0 * ctx->v_0 * PetscRealPart(tt[0]);
212: PetscCall(DMCompositeRestoreAccessArray(pack, X, nDMs, NULL, XsubArray)); // read only
213: PetscCall(PetscFree(XsubArray));
215: if (rectx->use_spitzer_eta) {
216: E = ctx->Ez = spit_eta * (rectx->j - J_re);
217: } else {
218: E = ctx->Ez; /* keep real E */
219: rectx->j = J; /* cache */
220: }
222: ratio = E / J / spit_eta;
223: if (stepi > 10 && !rectx->use_spitzer_eta && (old_ratio - ratio < 1.e-6)) {
224: rectx->pulse_start = time + 0.98 * dt;
225: rectx->use_spitzer_eta = PETSC_TRUE;
226: }
227: PetscCall(TSGetConvergedReason(ts, &reason));
228: PetscCall(TSGetConvergedReason(ts, &reason));
229: if (rectx->plotting || stepi == 0 || reason || rectx->pulse_start == time + 0.98 * dt) {
230: PetscCall(PetscPrintf(ctx->comm, "testSpitzer: %4" PetscInt_FMT ") time=%11.4e n_e= %10.3e E= %10.3e J= %10.3e J_re= %10.3e %.3g%% Te_kev= %10.3e Z_eff=%g E/J to eta ratio= %g (diff=%g) %s %s spit_eta=%g\n", stepi, (double)time,
231: (double)(n_e / ctx->n_0), (double)ctx->Ez, (double)J, (double)J_re, (double)(100 * J_re / J), (double)Te_kev, (double)Z, (double)ratio, (double)(old_ratio - ratio), rectx->use_spitzer_eta ? "using Spitzer eta*J E" : "constant E", rectx->pulse_start != time + 0.98 * dt ? "normal" : "transition", (double)spit_eta));
232: PetscCheck(rectx->pulse_start != (time + 0.98 * dt), PETSC_COMM_WORLD, PETSC_ERR_ARG_WRONG, "Spitzer complete ratio=%g", (double)ratio);
233: }
234: old_ratio = ratio;
235: PetscFunctionReturn(PETSC_SUCCESS);
236: }
238: static const double ppp = 2;
239: static void f0_0_diff_lp(PetscInt dim, PetscInt Nf, PetscInt NfAux, const PetscInt uOff[], const PetscInt uOff_x[], const PetscScalar u[], const PetscScalar u_t[], const PetscScalar u_x[], const PetscInt aOff[], const PetscInt aOff_x[], const PetscScalar a[], const PetscScalar a_t[], const PetscScalar a_x[], PetscReal t, const PetscReal x[], PetscInt numConstants, const PetscScalar constants[], PetscScalar *f0)
240: {
241: LandauCtx *ctx = (LandauCtx *)constants;
242: REctx *rectx = (REctx *)ctx->data;
243: PetscInt ii = rectx->idx, i;
244: const PetscReal kT_m = ctx->k * ctx->thermal_temps[ii] / ctx->masses[ii]; /* kT/m */
245: const PetscReal n = ctx->n[ii];
246: PetscReal diff, f_maxwell, v2 = 0, theta = 2 * kT_m / (ctx->v_0 * ctx->v_0); /* theta = 2kT/mc^2 */
247: for (i = 0; i < dim; ++i) v2 += x[i] * x[i];
248: f_maxwell = n * PetscPowReal(PETSC_PI * theta, -1.5) * (PetscExpReal(-v2 / theta));
249: diff = 2. * PETSC_PI * x[0] * (PetscRealPart(u[ii]) - f_maxwell);
250: f0[0] = PetscPowReal(diff, ppp);
251: }
252: static void f0_0_maxwellian_lp(PetscInt dim, PetscInt Nf, PetscInt NfAux, const PetscInt uOff[], const PetscInt uOff_x[], const PetscScalar u[], const PetscScalar u_t[], const PetscScalar u_x[], const PetscInt aOff[], const PetscInt aOff_x[], const PetscScalar a[], const PetscScalar a_t[], const PetscScalar a_x[], PetscReal t, const PetscReal x[], PetscInt numConstants, const PetscScalar constants[], PetscScalar *f0)
253: {
254: LandauCtx *ctx = (LandauCtx *)constants;
255: REctx *rectx = (REctx *)ctx->data;
256: PetscInt ii = rectx->idx, i;
257: const PetscReal kT_m = ctx->k * ctx->thermal_temps[ii] / ctx->masses[ii]; /* kT/m */
258: const PetscReal n = ctx->n[ii];
259: PetscReal f_maxwell, v2 = 0, theta = 2 * kT_m / (ctx->v_0 * ctx->v_0); /* theta = 2kT/mc^2 */
260: for (i = 0; i < dim; ++i) v2 += x[i] * x[i];
261: f_maxwell = 2. * PETSC_PI * x[0] * n * PetscPowReal(PETSC_PI * theta, -1.5) * (PetscExpReal(-v2 / theta));
262: f0[0] = PetscPowReal(f_maxwell, ppp);
263: }
265: /* */
266: static PetscErrorCode testStable(TS ts, Vec X, PetscInt stepi, PetscReal time, PetscBool islast, LandauCtx *ctx, REctx *rectx)
267: {
268: PetscDS prob;
269: Vec X2;
270: PetscReal ediff, idiff = 0, lpm0, lpm1 = 1;
271: PetscScalar tt[LANDAU_MAX_SPECIES];
272: DM dm, plex = ctx->plex[0];
274: PetscFunctionBeginUser;
275: PetscCall(VecGetDM(X, &dm));
276: PetscCall(DMGetDS(plex, &prob));
277: PetscCall(VecDuplicate(X, &X2));
278: PetscCall(VecCopy(X, X2));
279: if (!rectx->X_0) {
280: PetscCall(VecDuplicate(X, &rectx->X_0));
281: PetscCall(VecCopy(X, rectx->X_0));
282: }
283: PetscCall(VecAXPY(X, -1.0, rectx->X_0));
284: PetscCall(PetscDSSetConstants(prob, sizeof(LandauCtx) / sizeof(PetscScalar), (PetscScalar *)ctx));
285: rectx->idx = 0;
286: PetscCall(PetscDSSetObjective(prob, 0, &f0_0_diff_lp));
287: PetscCall(DMPlexComputeIntegralFEM(plex, X2, tt, NULL));
288: ediff = PetscPowReal(PetscRealPart(tt[0]), 1. / ppp);
289: PetscCall(PetscDSSetObjective(prob, 0, &f0_0_maxwellian_lp));
290: PetscCall(DMPlexComputeIntegralFEM(plex, X2, tt, NULL));
291: lpm0 = PetscPowReal(PetscRealPart(tt[0]), 1. / ppp);
292: if (ctx->num_species > 1) {
293: rectx->idx = 1;
294: PetscCall(PetscDSSetObjective(prob, 0, &f0_0_diff_lp));
295: PetscCall(DMPlexComputeIntegralFEM(plex, X2, tt, NULL));
296: idiff = PetscPowReal(PetscRealPart(tt[0]), 1. / ppp);
297: PetscCall(PetscDSSetObjective(prob, 0, &f0_0_maxwellian_lp));
298: PetscCall(DMPlexComputeIntegralFEM(plex, X2, tt, NULL));
299: lpm1 = PetscPowReal(PetscRealPart(tt[0]), 1. / ppp);
300: }
301: PetscCall(PetscPrintf(PETSC_COMM_WORLD, "%s %" PetscInt_FMT ") time=%10.3e n-%d norm electrons/max=%20.13e ions/max=%20.13e\n", "----", stepi, (double)time, (int)ppp, (double)(ediff / lpm0), (double)(idiff / lpm1)));
302: /* view */
303: PetscCall(VecCopy(X2, X));
304: PetscCall(VecDestroy(&X2));
305: if (islast) {
306: PetscCall(VecDestroy(&rectx->X_0));
307: rectx->X_0 = NULL;
308: }
309: PetscFunctionReturn(PETSC_SUCCESS);
310: }
312: static PetscErrorCode EInduction(Vec X, Vec X_t, PetscInt step, PetscReal time, LandauCtx *ctx, PetscReal *a_E)
313: {
314: REctx *rectx = (REctx *)ctx->data;
315: PetscInt ii;
316: DM dm, plex;
317: PetscScalar tt[LANDAU_MAX_SPECIES], qv0[LANDAU_MAX_SPECIES];
318: PetscReal dJ_dt;
319: PetscDS prob;
321: PetscFunctionBeginUser;
322: for (ii = 0; ii < ctx->num_species; ii++) qv0[ii] = ctx->charges[ii] * ctx->v_0;
323: PetscCall(VecGetDM(X, &dm));
324: PetscCall(DMGetDS(dm, &prob));
325: PetscCall(DMConvert(dm, DMPLEX, &plex));
326: /* get d current / dt */
327: PetscCall(PetscDSSetConstants(prob, ctx->num_species, qv0));
328: PetscCall(PetscDSSetObjective(prob, 0, &f0_jz_sum));
329: PetscCheck(X_t, PETSC_COMM_SELF, PETSC_ERR_PLIB, "X_t");
330: PetscCall(DMPlexComputeIntegralFEM(plex, X_t, tt, NULL));
331: dJ_dt = -ctx->n_0 * PetscRealPart(tt[0]) / ctx->t_0;
332: /* E induction */
333: *a_E = -rectx->L * dJ_dt + rectx->Ez_initial;
334: PetscCall(DMDestroy(&plex));
335: PetscFunctionReturn(PETSC_SUCCESS);
336: }
338: static PetscErrorCode EConstant(Vec X, Vec X_t, PetscInt step, PetscReal time, LandauCtx *ctx, PetscReal *a_E)
339: {
340: PetscFunctionBeginUser;
341: *a_E = ctx->Ez;
342: PetscFunctionReturn(PETSC_SUCCESS);
343: }
345: static PetscErrorCode ENone(Vec X, Vec X_t, PetscInt step, PetscReal time, LandauCtx *ctx, PetscReal *a_E)
346: {
347: PetscFunctionBeginUser;
348: *a_E = 0;
349: PetscFunctionReturn(PETSC_SUCCESS);
350: }
352: /* ------------------------------------------------------------------- */
353: /*
354: FormSource - Evaluates source terms F(t).
356: Input Parameters:
357: . ts - the TS context
358: . time -
359: . X_dummmy - input vector
360: . dummy - optional user-defined context, as set by SNESSetFunction()
362: Output Parameter:
363: . F - function vector
364: */
365: static PetscErrorCode FormSource(TS ts, PetscReal ftime, Vec X_dummmy, Vec F, void *dummy)
366: {
367: PetscReal new_imp_rate;
368: LandauCtx *ctx;
369: DM pack;
370: REctx *rectx;
372: PetscFunctionBeginUser;
373: PetscCall(TSGetDM(ts, &pack));
374: PetscCall(DMGetApplicationContext(pack, &ctx));
375: rectx = (REctx *)ctx->data;
376: /* check for impurities */
377: PetscCall(rectx->impuritySrcRate(ftime, &new_imp_rate, ctx));
378: if (new_imp_rate != 0) {
379: if (new_imp_rate != rectx->current_rate) {
380: PetscInt ii;
381: PetscReal dne_dt, dni_dt, tilda_ns[LANDAU_MAX_SPECIES], temps[LANDAU_MAX_SPECIES];
382: Vec globFarray[LANDAU_MAX_GRIDS * LANDAU_MAX_BATCH_SZ];
383: rectx->current_rate = new_imp_rate;
384: for (ii = 1; ii < LANDAU_MAX_SPECIES; ii++) tilda_ns[ii] = 0;
385: for (ii = 1; ii < LANDAU_MAX_SPECIES; ii++) temps[ii] = 1;
386: dni_dt = new_imp_rate /* *ctx->t_0 */; /* fully ionized immediately, no normalize, stay in non-dim */
387: dne_dt = new_imp_rate * rectx->Ne_ion /* *ctx->t_0 */;
388: tilda_ns[0] = dne_dt;
389: tilda_ns[rectx->imp_idx] = dni_dt;
390: temps[0] = rectx->T_cold;
391: temps[rectx->imp_idx] = rectx->T_cold;
392: PetscCall(PetscInfo(ctx->plex[0], "\tHave new_imp_rate= %10.3e time= %10.3e de/dt= %10.3e di/dt= %10.3e ***\n", (double)new_imp_rate, (double)ftime, (double)dne_dt, (double)dni_dt));
393: PetscCall(DMCompositeGetAccessArray(pack, F, ctx->num_grids * ctx->batch_sz, NULL, globFarray));
394: for (PetscInt grid = 0; grid < ctx->num_grids; grid++) {
395: /* add it */
396: PetscCall(DMPlexLandauAddMaxwellians(ctx->plex[grid], globFarray[LAND_PACK_IDX(0, grid)], ftime, temps, tilda_ns, grid, 0, 1, ctx));
397: }
398: // Does DMCompositeRestoreAccessArray copy the data back? (no)
399: PetscCall(DMCompositeRestoreAccessArray(pack, F, ctx->num_grids * ctx->batch_sz, NULL, globFarray));
400: }
401: } else {
402: PetscCall(VecZeroEntries(F));
403: rectx->current_rate = 0;
404: }
405: PetscFunctionReturn(PETSC_SUCCESS);
406: }
408: PetscErrorCode Monitor(TS ts, PetscInt stepi, PetscReal time, Vec X, void *actx)
409: {
410: LandauCtx *ctx = (LandauCtx *)actx; /* user-defined application context */
411: REctx *rectx = (REctx *)ctx->data;
412: DM pack = NULL;
413: Vec globXArray[LANDAU_MAX_GRIDS * LANDAU_MAX_BATCH_SZ];
414: TSConvergedReason reason;
416: PetscFunctionBeginUser;
417: PetscCall(TSGetConvergedReason(ts, &reason));
418: if (rectx->grid_view_idx != -1 || (reason && ctx->verbose > 3)) {
419: PetscCall(VecGetDM(X, &pack));
420: PetscCall(DMCompositeGetAccessArray(pack, X, ctx->num_grids * ctx->batch_sz, NULL, globXArray));
421: }
422: if (stepi > rectx->plotStep && rectx->plotting) {
423: rectx->plotting = PETSC_FALSE; /* was doing diagnostics, now done */
424: rectx->plotIdx++;
425: }
426: /* view */
427: if (time / rectx->plotDt >= (PetscReal)rectx->plotIdx || reason) {
428: if ((reason || stepi == 0 || rectx->plotIdx % rectx->print_period == 0) && ctx->verbose > 1) {
429: /* print norms */
430: PetscCall(DMPlexLandauPrintNorms(X, stepi));
431: }
432: if (!rectx->plotting) { /* first step of possible backtracks */
433: rectx->plotting = PETSC_TRUE;
434: /* diagnostics + change E field with Sptizer (not just a monitor) */
435: PetscCall(rectx->test(ts, X, stepi, time, reason ? PETSC_TRUE : PETSC_FALSE, ctx, rectx));
436: } else {
437: PetscCall(PetscPrintf(PETSC_COMM_WORLD, "\t\t ERROR SKIP test spit ------\n"));
438: rectx->plotting = PETSC_TRUE;
439: }
440: if (rectx->grid_view_idx != -1) {
441: PetscCall(PetscObjectSetName((PetscObject)globXArray[LAND_PACK_IDX(ctx->batch_view_idx, rectx->grid_view_idx)], rectx->grid_view_idx == 0 ? "ue" : "ui"));
442: /* view, overwrite step when back tracked */
443: PetscCall(DMSetOutputSequenceNumber(ctx->plex[rectx->grid_view_idx], rectx->plotIdx, time * ctx->t_0));
444: PetscCall(VecViewFromOptions(globXArray[LAND_PACK_IDX(ctx->batch_view_idx, rectx->grid_view_idx)], NULL, "-ex2_vec_view"));
445: }
446: rectx->plotStep = stepi;
447: } else {
448: if (rectx->plotting) PetscCall(PetscPrintf(PETSC_COMM_WORLD, " ERROR rectx->plotting=%s step %" PetscInt_FMT "\n", PetscBools[rectx->plotting], stepi));
449: /* diagnostics + change E field with Sptizer (not just a monitor) - can we lag this? */
450: PetscCall(rectx->test(ts, X, stepi, time, reason ? PETSC_TRUE : PETSC_FALSE, ctx, rectx));
451: }
452: /* parallel check that only works of all batches are identical */
453: if (reason && ctx->verbose > 3 && ctx->batch_sz > 1) {
454: PetscReal val, rval;
455: PetscMPIInt rank;
456: PetscCallMPI(MPI_Comm_rank(PETSC_COMM_WORLD, &rank));
457: for (PetscInt grid = 0; grid < ctx->num_grids; grid++) {
458: PetscInt nerrors = 0;
459: for (PetscInt i = 0; i < ctx->batch_sz; i++) {
460: PetscCall(VecNorm(globXArray[LAND_PACK_IDX(i, grid)], NORM_2, &val));
461: if (i == 0) rval = val;
462: else if ((val = PetscAbs(val - rval) / rval) > 1000 * PETSC_MACHINE_EPSILON) {
463: PetscCall(PetscPrintf(PETSC_COMM_SELF, " [%d] Warning %" PetscInt_FMT ".%" PetscInt_FMT ") diff = %2.15e\n", rank, grid, i, (double)val));
464: nerrors++;
465: }
466: }
467: if (nerrors) {
468: PetscCall(PetscPrintf(PETSC_COMM_SELF, " ***** [%d] ERROR max %" PetscInt_FMT " errors\n", rank, nerrors));
469: } else {
470: PetscCall(PetscPrintf(PETSC_COMM_WORLD, "[%d] %" PetscInt_FMT ") batch consistency check OK\n", rank, grid));
471: }
472: }
473: }
474: rectx->idx = 0;
475: if (rectx->grid_view_idx != -1 || (reason && ctx->verbose > 3)) PetscCall(DMCompositeRestoreAccessArray(pack, X, ctx->num_grids * ctx->batch_sz, NULL, globXArray));
476: PetscFunctionReturn(PETSC_SUCCESS);
477: }
479: PetscErrorCode PreStep(TS ts)
480: {
481: LandauCtx *ctx;
482: REctx *rectx;
483: DM dm;
484: PetscInt stepi;
485: PetscReal time;
486: Vec X;
488: PetscFunctionBeginUser;
489: /* not used */
490: PetscCall(TSGetDM(ts, &dm));
491: PetscCall(TSGetTime(ts, &time));
492: PetscCall(TSGetSolution(ts, &X));
493: PetscCall(DMGetApplicationContext(dm, &ctx));
494: rectx = (REctx *)ctx->data;
495: PetscCall(TSGetStepNumber(ts, &stepi));
496: /* update E */
497: PetscCall(rectx->E(X, NULL, stepi, time, ctx, &ctx->Ez));
498: PetscFunctionReturn(PETSC_SUCCESS);
499: }
501: /* model for source of non-ionized impurities, profile provided by model, in du/dt form in normalized units (tricky because n_0 is normalized with electrons) */
502: static PetscErrorCode stepSrc(PetscReal time, PetscReal *rho, LandauCtx *ctx)
503: {
504: REctx *rectx = (REctx *)ctx->data;
506: PetscFunctionBeginUser;
507: if (time >= rectx->pulse_start) *rho = rectx->pulse_rate;
508: else *rho = 0.;
509: PetscFunctionReturn(PETSC_SUCCESS);
510: }
511: static PetscErrorCode zeroSrc(PetscReal time, PetscReal *rho, LandauCtx *ctx)
512: {
513: PetscFunctionBeginUser;
514: *rho = 0.;
515: PetscFunctionReturn(PETSC_SUCCESS);
516: }
517: static PetscErrorCode pulseSrc(PetscReal time, PetscReal *rho, LandauCtx *ctx)
518: {
519: REctx *rectx = (REctx *)ctx->data;
521: PetscFunctionBeginUser;
522: PetscCheck(rectx->pulse_start != PETSC_MAX_REAL, PETSC_COMM_WORLD, PETSC_ERR_ARG_WRONG, "'-ex2_pulse_start_time X' must be used with '-ex2_impurity_source_type pulse'");
523: if (time < rectx->pulse_start || time > rectx->pulse_start + 3 * rectx->pulse_width) *rho = 0;
524: else {
525: double x = PetscSinReal((time - rectx->pulse_start) / (3 * rectx->pulse_width) * 2 * PETSC_PI - PETSC_PI / 2) + 1; /* 0:2, integrates to 1.0 */
526: *rho = rectx->pulse_rate * x / (3 * rectx->pulse_width);
527: if (!rectx->use_spitzer_eta) rectx->use_spitzer_eta = PETSC_TRUE; /* use it next time */
528: }
529: PetscFunctionReturn(PETSC_SUCCESS);
530: }
534: static PetscErrorCode ProcessREOptions(REctx *rectx, const LandauCtx *ctx, DM dm, const char prefix[])
535: {
536: PetscFunctionList plist = NULL, testlist = NULL, elist = NULL;
537: char pname[256], testname[256], ename[256];
538: DM dm_dummy;
539: PetscBool Connor_E = PETSC_FALSE;
541: PetscFunctionBeginUser;
542: PetscCall(DMCreate(PETSC_COMM_WORLD, &dm_dummy));
543: rectx->Ne_ion = 1; /* number of electrons given up by impurity ion */
544: rectx->T_cold = .005; /* kev */
545: rectx->ion_potential = 15; /* ev */
546: rectx->L = 2;
547: rectx->X_0 = NULL;
548: rectx->imp_idx = ctx->num_species - 1; /* default ionized impurity as last one */
549: rectx->pulse_start = PETSC_MAX_REAL;
550: rectx->pulse_width = 1;
551: rectx->plotStep = PETSC_MAX_INT;
552: rectx->pulse_rate = 1.e-1;
553: rectx->current_rate = 0;
554: rectx->plotIdx = 0;
555: rectx->j = 0;
556: rectx->plotDt = 1.0;
557: rectx->plotting = PETSC_FALSE;
558: rectx->use_spitzer_eta = PETSC_FALSE;
559: rectx->idx = 0;
560: rectx->print_period = 10;
561: rectx->grid_view_idx = -1; // do not get if not needed
562: /* Register the available impurity sources */
563: PetscCall(PetscFunctionListAdd(&plist, "step", &stepSrc));
564: PetscCall(PetscFunctionListAdd(&plist, "none", &zeroSrc));
565: PetscCall(PetscFunctionListAdd(&plist, "pulse", &pulseSrc));
566: PetscCall(PetscStrncpy(pname, "none", sizeof(pname)));
567: PetscCall(PetscFunctionListAdd(&testlist, "none", &testNone));
568: PetscCall(PetscFunctionListAdd(&testlist, "spitzer", &testSpitzer));
569: PetscCall(PetscFunctionListAdd(&testlist, "stable", &testStable));
570: PetscCall(PetscStrncpy(testname, "none", sizeof(testname)));
571: PetscCall(PetscFunctionListAdd(&elist, "none", &ENone));
572: PetscCall(PetscFunctionListAdd(&elist, "induction", &EInduction));
573: PetscCall(PetscFunctionListAdd(&elist, "constant", &EConstant));
574: PetscCall(PetscStrncpy(ename, "constant", sizeof(ename)));
576: PetscOptionsBegin(PETSC_COMM_SELF, prefix, "Options for Runaway/seed electron model", "none");
577: PetscCall(PetscOptionsReal("-ex2_plot_dt", "Plotting interval", "ex2.c", rectx->plotDt, &rectx->plotDt, NULL));
578: if (rectx->plotDt < 0) rectx->plotDt = 1e30;
579: if (rectx->plotDt == 0) rectx->plotDt = 1e-30;
580: PetscCall(PetscOptionsInt("-ex2_print_period", "Plotting interval", "ex2.c", rectx->print_period, &rectx->print_period, NULL));
581: PetscCall(PetscOptionsInt("-ex2_grid_view_idx", "grid_view_idx", "ex2.c", rectx->grid_view_idx, &rectx->grid_view_idx, NULL));
582: PetscCheck(rectx->grid_view_idx < ctx->num_grids || rectx->grid_view_idx == -1, PETSC_COMM_WORLD, PETSC_ERR_ARG_WRONG, "rectx->grid_view_idx (%" PetscInt_FMT ") >= ctx->num_grids (%" PetscInt_FMT ")", rectx->imp_idx, ctx->num_grids);
583: PetscCall(PetscOptionsFList("-ex2_impurity_source_type", "Name of impurity source to run", "", plist, pname, pname, sizeof(pname), NULL));
584: PetscCall(PetscOptionsFList("-ex2_test_type", "Name of test to run", "", testlist, testname, testname, sizeof(testname), NULL));
585: PetscCall(PetscOptionsInt("-ex2_impurity_index", "index of sink for impurities", "none", rectx->imp_idx, &rectx->imp_idx, NULL));
586: PetscCheck((rectx->imp_idx < ctx->num_species && rectx->imp_idx >= 1) || ctx->num_species <= 1, PETSC_COMM_WORLD, PETSC_ERR_ARG_WRONG, "index of sink for impurities ions is out of range (%" PetscInt_FMT "), must be > 0 && < NS", rectx->imp_idx);
587: PetscCall(PetscOptionsFList("-ex2_e_field_type", "Electric field type", "", elist, ename, ename, sizeof(ename), NULL));
588: rectx->Ne_ion = -ctx->charges[rectx->imp_idx] / ctx->charges[0];
589: PetscCall(PetscOptionsReal("-ex2_t_cold", "Temperature of cold electron and ions after ionization in keV", "none", rectx->T_cold, &rectx->T_cold, NULL));
590: PetscCall(PetscOptionsReal("-ex2_pulse_start_time", "Time at which pulse happens for 'pulse' source", "none", rectx->pulse_start, &rectx->pulse_start, NULL));
591: PetscCall(PetscOptionsReal("-ex2_pulse_width_time", "Width of pulse 'pulse' source", "none", rectx->pulse_width, &rectx->pulse_width, NULL));
592: PetscCall(PetscOptionsReal("-ex2_pulse_rate", "Number density of pulse for 'pulse' source", "none", rectx->pulse_rate, &rectx->pulse_rate, NULL));
593: rectx->T_cold *= 1.16e7; /* convert to Kelvin */
594: PetscCall(PetscOptionsReal("-ex2_ion_potential", "Potential to ionize impurity (should be array) in ev", "none", rectx->ion_potential, &rectx->ion_potential, NULL));
595: PetscCall(PetscOptionsReal("-ex2_inductance", "Inductance E field", "none", rectx->L, &rectx->L, NULL));
596: PetscCall(PetscOptionsBool("-ex2_connor_e_field_units", "Scale Ex but Connor-Hastie E_c", "none", Connor_E, &Connor_E, NULL));
597: PetscCall(PetscInfo(dm_dummy, "Num electrons from ions=%g, T_cold=%10.3e, ion potential=%10.3e, E_z=%10.3e v_0=%10.3e\n", (double)rectx->Ne_ion, (double)rectx->T_cold, (double)rectx->ion_potential, (double)ctx->Ez, (double)ctx->v_0));
598: PetscOptionsEnd();
599: /* get impurity source rate function */
600: PetscCall(PetscFunctionListFind(plist, pname, &rectx->impuritySrcRate));
601: PetscCheck(rectx->impuritySrcRate, PETSC_COMM_WORLD, PETSC_ERR_ARG_WRONG, "No impurity source function found '%s'", pname);
602: PetscCall(PetscFunctionListFind(testlist, testname, &rectx->test));
603: PetscCheck(rectx->test, PETSC_COMM_WORLD, PETSC_ERR_ARG_WRONG, "No test found '%s'", testname);
604: PetscCall(PetscFunctionListFind(elist, ename, &rectx->E));
605: PetscCheck(rectx->E, PETSC_COMM_WORLD, PETSC_ERR_ARG_WRONG, "No E field function found '%s'", ename);
606: PetscCall(PetscFunctionListDestroy(&plist));
607: PetscCall(PetscFunctionListDestroy(&testlist));
608: PetscCall(PetscFunctionListDestroy(&elist));
610: /* convert E from Connor-Hastie E_c units to real if doing Spitzer E */
611: if (Connor_E) {
612: PetscReal E = ctx->Ez, Tev = ctx->thermal_temps[0] * 8.621738e-5, n = ctx->n_0 * ctx->n[0];
613: CalculateE(Tev, n, ctx->lambdas[0][1], ctx->epsilon0, &E);
614: ((LandauCtx *)ctx)->Ez *= E;
615: }
616: PetscCall(DMDestroy(&dm_dummy));
617: PetscFunctionReturn(PETSC_SUCCESS);
618: }
620: int main(int argc, char **argv)
621: {
622: DM pack;
623: Vec X;
624: PetscInt dim = 2, nDMs;
625: TS ts;
626: Mat J;
627: PetscDS prob;
628: LandauCtx *ctx;
629: REctx *rectx;
630: PetscMPIInt rank;
631: PetscLogStage stage;
633: PetscFunctionBeginUser;
634: PetscCall(PetscInitialize(&argc, &argv, NULL, help));
635: PetscCallMPI(MPI_Comm_rank(PETSC_COMM_WORLD, &rank));
636: if (rank) { /* turn off output stuff for duplicate runs */
637: PetscCall(PetscOptionsClearValue(NULL, "-ex2_dm_view"));
638: PetscCall(PetscOptionsClearValue(NULL, "-ex2_vec_view"));
639: PetscCall(PetscOptionsClearValue(NULL, "-ex2_vec_view_init"));
640: PetscCall(PetscOptionsClearValue(NULL, "-ex2_dm_view_init"));
641: PetscCall(PetscOptionsClearValue(NULL, "-info")); /* this does not work */
642: }
643: PetscCall(PetscOptionsGetInt(NULL, NULL, "-dim", &dim, NULL));
644: /* Create a mesh */
645: PetscCall(DMPlexLandauCreateVelocitySpace(PETSC_COMM_WORLD, dim, "", &X, &J, &pack));
646: PetscCall(DMCompositeGetNumberDM(pack, &nDMs));
647: PetscCall(PetscObjectSetName((PetscObject)J, "Jacobian"));
648: PetscCall(PetscObjectSetName((PetscObject)X, "f"));
649: PetscCall(DMGetApplicationContext(pack, &ctx));
650: PetscCall(DMSetUp(pack));
651: /* context */
652: PetscCall(PetscNew(&rectx));
653: ctx->data = rectx;
654: PetscCall(ProcessREOptions(rectx, ctx, pack, ""));
655: PetscCall(DMGetDS(pack, &prob));
656: if (rectx->grid_view_idx != -1) {
657: Vec *XsubArray = NULL;
658: PetscCall(PetscMalloc(sizeof(*XsubArray) * nDMs, &XsubArray));
659: PetscCall(DMCompositeGetAccessArray(pack, X, nDMs, NULL, XsubArray)); // read only
660: PetscCall(PetscObjectSetName((PetscObject)XsubArray[LAND_PACK_IDX(ctx->batch_view_idx, rectx->grid_view_idx)], rectx->grid_view_idx == 0 ? "ue" : "ui"));
661: PetscCall(DMSetOutputSequenceNumber(ctx->plex[rectx->grid_view_idx], 0, 0.0));
662: PetscCall(DMViewFromOptions(ctx->plex[rectx->grid_view_idx], NULL, "-ex2_dm_view"));
663: PetscCall(DMViewFromOptions(ctx->plex[rectx->grid_view_idx], NULL, "-ex2_dm_view_init"));
664: PetscCall(VecViewFromOptions(XsubArray[LAND_PACK_IDX(ctx->batch_view_idx, rectx->grid_view_idx)], NULL, "-ex2_vec_view")); // initial condition (monitor plots after step)
665: PetscCall(VecViewFromOptions(XsubArray[LAND_PACK_IDX(ctx->batch_view_idx, rectx->grid_view_idx)], NULL, "-ex2_vec_view_init")); // initial condition (monitor plots after step)
666: PetscCall(DMCompositeRestoreAccessArray(pack, X, nDMs, NULL, XsubArray)); // read only
667: PetscCall(PetscFree(XsubArray));
668: }
669: /* Create timestepping solver context */
670: PetscCall(TSCreate(PETSC_COMM_SELF, &ts));
671: PetscCall(TSSetDM(ts, pack));
672: PetscCall(TSSetIFunction(ts, NULL, DMPlexLandauIFunction, NULL));
673: PetscCall(TSSetIJacobian(ts, J, J, DMPlexLandauIJacobian, NULL));
674: PetscCall(TSSetRHSFunction(ts, NULL, FormSource, NULL));
675: PetscCall(TSSetFromOptions(ts));
676: PetscCall(TSSetSolution(ts, X));
677: PetscCall(TSSetApplicationContext(ts, ctx));
678: PetscCall(TSMonitorSet(ts, Monitor, ctx, NULL));
679: PetscCall(TSSetPreStep(ts, PreStep));
680: rectx->Ez_initial = ctx->Ez; /* cache for induction calculation - applied E field */
681: if (1) { /* warm up an test just DMPlexLandauIJacobian */
682: Vec vec;
683: PetscInt nsteps;
684: PetscReal dt;
685: PetscCall(PetscLogStageRegister("Warmup", &stage));
686: PetscCall(PetscLogStagePush(stage));
687: PetscCall(VecDuplicate(X, &vec));
688: PetscCall(VecCopy(X, vec));
689: PetscCall(TSGetMaxSteps(ts, &nsteps));
690: PetscCall(TSGetTimeStep(ts, &dt));
691: PetscCall(TSSetMaxSteps(ts, 1));
692: PetscCall(TSSolve(ts, X));
693: PetscCall(TSSetMaxSteps(ts, nsteps));
694: PetscCall(TSSetStepNumber(ts, 0));
695: PetscCall(TSSetTime(ts, 0));
696: PetscCall(TSSetTimeStep(ts, dt));
697: rectx->plotIdx = 0;
698: rectx->plotting = PETSC_FALSE;
699: PetscCall(PetscLogStagePop());
700: PetscCall(VecCopy(vec, X));
701: PetscCall(VecDestroy(&vec));
702: PetscCall(PetscObjectStateIncrease((PetscObject)ctx->J));
703: }
704: /* go */
705: PetscCall(PetscLogStageRegister("Solve", &stage));
706: ctx->stage = 0; // lets not use this stage
707: PetscCall(PetscLogStagePush(stage));
708: #if defined(PETSC_HAVE_CUDA_NVTX)
709: nvtxRangePushA("ex2-TSSolve-warm");
710: #endif
711: PetscCall(TSSolve(ts, X));
712: #if defined(PETSC_HAVE_CUDA_NVTX)
713: nvtxRangePop();
714: #endif
715: PetscCall(PetscLogStagePop());
716: /* clean up */
717: PetscCall(DMPlexLandauDestroyVelocitySpace(&pack));
718: PetscCall(TSDestroy(&ts));
719: PetscCall(VecDestroy(&X));
720: PetscCall(PetscFree(rectx));
721: PetscCall(PetscFinalize());
722: return 0;
723: }
725: /*TEST
727: testset:
728: requires: p4est !complex double defined(PETSC_USE_DMLANDAU_2D)
729: output_file: output/ex2_0.out
730: args: -dm_landau_num_species_grid 1,1 -dm_landau_Ez 0 -petscspace_degree 3 -petscspace_poly_tensor 1 -dm_landau_type p4est -dm_landau_ion_masses 2 -dm_landau_ion_charges 1 -dm_landau_thermal_temps 5,5 -dm_landau_n 2,2 -dm_landau_n_0 5e19 -ts_monitor -snes_rtol 1.e-9 -snes_stol 1.e-14 -snes_monitor -snes_converged_reason -snes_max_it 10 -ts_type arkimex -ts_arkimex_type 1bee -ts_max_snes_failures -1 -ts_rtol 1e-3 -ts_dt 1.e-2 -ts_max_time 1 -ts_adapt_clip .5,1.25 -ts_max_steps 2 -ts_adapt_scale_solve_failed 0.75 -ts_adapt_time_step_increase_delay 5 -dm_landau_amr_levels_max 2,2 -dm_landau_amr_re_levels 2 -dm_landau_re_radius 0 -ex2_impurity_source_type pulse -ex2_pulse_start_time 1e-1 -ex2_pulse_width_time 10 -ex2_pulse_rate 1e-2 -ex2_t_cold .05 -ex2_plot_dt 1e-1 -dm_refine 0 -dm_landau_gpu_assembly true -dm_landau_batch_size 2 -dm_landau_verbose 2 -dm_landau_domain_radius 5.,5.
731: test:
732: suffix: cpu
733: args: -dm_landau_device_type cpu -ksp_type bicg -pc_type jacobi
734: test:
735: suffix: kokkos
736: requires: kokkos_kernels !defined(PETSC_HAVE_CUDA_CLANG) !defined(PETSC_HAVE_SYCL)
737: args: -dm_landau_device_type kokkos -dm_mat_type aijkokkos -dm_vec_type kokkos -ksp_type bicg -pc_type jacobi
738: test:
739: suffix: kokkos_batch
740: requires: kokkos_kernels
741: args: -dm_landau_device_type kokkos -dm_mat_type aijkokkos -dm_vec_type kokkos -ksp_type preonly -pc_type bjkokkos -pc_bjkokkos_ksp_type bicg -pc_bjkokkos_pc_type jacobi
742: test:
743: suffix: kokkos_batch_tfqmr
744: requires: kokkos_kernels !defined(PETSC_HAVE_CUDA_CLANG) !defined(PETSC_HAVE_SYCL)
745: args: -dm_landau_device_type kokkos -dm_mat_type aijkokkos -dm_vec_type kokkos -ksp_type preonly -pc_type bjkokkos -pc_bjkokkos_ksp_type tfqmr -pc_bjkokkos_pc_type jacobi
747: test:
748: requires: !complex double defined(PETSC_USE_DMLANDAU_2D) !kokkos_kernels !cuda
749: suffix: single
750: nsize: 1
751: args: -dm_refine 2 -dm_landau_num_species_grid 1 -dm_landau_thermal_temps 1 -dm_landau_electron_shift 1.25 -petscspace_degree 3 -snes_converged_reason -ts_type beuler -ts_dt .1 -ex2_plot_dt .1 -ts_max_steps 1 -ex2_grid_view_idx 0 -ex2_dm_view -snes_rtol 1.e-13 -snes_stol 1.e-13 -dm_landau_verbose 2 -ex2_print_period 1 -ksp_type preonly -pc_type lu -dm_landau_device_type cpu -dm_landau_use_relativistic_corrections
753: testset:
754: requires: !complex double defined(PETSC_USE_DMLANDAU_2D)
755: nsize: 1
756: output_file: output/ex2_simplex.out
757: args: -dim 2 -dm_landau_num_species_grid 1,1 -petscspace_degree 2 -dm_landau_simplex -dm_landau_ion_masses 2 -dm_landau_ion_charges 1 -dm_landau_thermal_temps 2,1 -dm_landau_n 1,1 -snes_rtol 1e-15 -snes_stol 1e-15 -snes_monitor -ts_type beuler -snes_converged_reason -ts_exact_final_time stepover -ts_dt .1 -ts_max_steps 1 -ts_max_snes_failures -1 -ksp_type preonly -pc_type lu -dm_landau_verbose 2 -ex2_grid_view_idx 0 -ex2_dm_view -dm_refine 1 -ksp_type bicg -pc_type jacobi
758: test:
759: suffix: simplex
760: args: -dm_landau_device_type cpu
761: test:
762: suffix: simplexkokkos
763: requires: kokkos_kernels !defined(PETSC_HAVE_CUDA_CLANG) !defined(PETSC_HAVE_SYCL)
764: args: -dm_landau_device_type kokkos -dm_mat_type aijkokkos -dm_vec_type kokkos
766: TEST*/