Actual source code: dmdaimpl.h

  1: /*
  2:    Distributed arrays - communication tools for parallel, rectangular grids.
  3: */

  5: #ifndef _DAIMPL_H
  6: #define _DAIMPL_H

  8: #include <petscdmda.h>
  9: #include <petsc/private/dmimpl.h>

 11: typedef struct {
 12:   PetscInt              M, N, P;                /* array dimensions */
 13:   PetscInt              m, n, p;                /* processor layout */
 14:   PetscInt              w;                      /* degrees of freedom per node */
 15:   PetscInt              s;                      /* stencil width */
 16:   PetscInt              xs, xe, ys, ye, zs, ze; /* range of local values */
 17:   PetscInt              Xs, Xe, Ys, Ye, Zs, Ze; /* range including ghost values
 18:                                                    values above already scaled by w */
 19:   PetscInt              base;                   /* global number of 1st local node, includes the * w term */
 20:   DMBoundaryType        bx, by, bz;             /* indicates type of ghost nodes at boundary */
 21:   VecScatter            gtol, ltol;             /* scatters, see below for details */
 22:   DMDAStencilType       stencil_type;           /* stencil, either box or star */
 23:   DMDAInterpolationType interptype;

 25:   PetscInt nlocal, Nlocal; /* local size of local vector and global vector, includes the * w term */

 27:   PetscInt xol, yol, zol;       /* overlap of local subdomains */
 28:   PetscInt xo, yo, zo;          /* offsets for the indices in x y and z */
 29:   PetscInt Mo, No, Po;          /* the size of the problem the offset is in to */
 30:   PetscInt Nsub;                /* number of local subdomains to decompose into */
 31:   PetscInt nonxs, nonys, nonzs; /* the nonoverlapping starts in the case of a subdomain da */
 32:   PetscInt nonxm, nonym, nonzm; /* the nonoverlapping sizes in the case of a subdomain da */

 34:   AO     ao;     /* application ordering context */
 35:   AOType aotype; /* type of application ordering */

 37:   char **fieldname;      /* names of individual components in vectors */
 38:   char **coordinatename; /* names of coordinate directions, for example, x, y, z */

 40:   PetscInt    *lx, *ly, *lz; /* number of nodes in each partition block along 3 axis */
 41:   Vec          natural;      /* global vector for storing items in natural order */
 42:   VecScatter   gton;         /* vector scatter from global to natural */
 43:   PetscMPIInt *neighbors;    /* ranks of all neighbors and self */

 45:   ISColoring localcoloring; /* set by DMCreateColoring() */
 46:   ISColoring ghostedcoloring;

 48:   DMDAElementType elementtype;
 49:   PetscInt        ne;       /* number of elements */
 50:   PetscInt        nen;      /* number of nodes per element */
 51:   PetscInt       *e;        /* the elements */
 52:   IS              ecorners; /* corners of the subdomain */

 54:   PetscInt refine_x, refine_y, refine_z;    /* ratio used in refining */
 55:   PetscInt coarsen_x, coarsen_y, coarsen_z; /* ratio used for coarsening */
 56:                                             /* if the refinement is done differently on different levels */
 57:   PetscInt refine_x_hier_n, *refine_x_hier, refine_y_hier_n, *refine_y_hier, refine_z_hier_n, *refine_z_hier;

 59: #define DMDA_MAX_WORK_ARRAYS 2 /* work arrays for holding work via DMDAGetArray() */
 60:   void *arrayin[DMDA_MAX_WORK_ARRAYS], *arrayout[DMDA_MAX_WORK_ARRAYS];
 61:   void *arrayghostedin[DMDA_MAX_WORK_ARRAYS], *arrayghostedout[DMDA_MAX_WORK_ARRAYS];
 62:   void *startin[DMDA_MAX_WORK_ARRAYS], *startout[DMDA_MAX_WORK_ARRAYS];
 63:   void *startghostedin[DMDA_MAX_WORK_ARRAYS], *startghostedout[DMDA_MAX_WORK_ARRAYS];

 65:   PetscErrorCode (*lf)(DM, Vec, Vec, void *);
 66:   PetscErrorCode (*lj)(DM, Vec, Vec, void *);

 68:   /* used by DMDASetBlockFills() */
 69:   PetscInt *ofill, *dfill;
 70:   PetscInt *ofillcols;

 72:   /* used by DMDASetMatPreallocateOnly() */
 73:   PetscBool prealloc_only;
 74:   PetscInt  preallocCenterDim; /* Dimension of the points which connect adjacent points for preallocation */
 75: } DM_DA;

 77: /*
 78:   Vectors:
 79:      Global has on each processor the interior degrees of freedom and
 80:          no ghost points. This vector is what the solvers usually see.
 81:      Local has on each processor the ghost points as well. This is
 82:           what code to calculate Jacobians, etc. usually sees.
 83:   Vector scatters:
 84:      gtol - Global representation to local
 85:      ltol - Local representation to local representation, updates the
 86:             ghostpoint values in the second vector from (correct) interior
 87:             values in the first vector.  This is good for explicit
 88:             nearest neighbor timestepping.
 89: */

 91: PETSC_INTERN PetscErrorCode VecView_MPI_DA(Vec, PetscViewer);
 92: PETSC_INTERN PetscErrorCode VecLoad_Default_DA(Vec, PetscViewer);
 93: PETSC_INTERN PetscErrorCode DMView_DA_Matlab(DM, PetscViewer);
 94: PETSC_INTERN PetscErrorCode DMView_DA_Binary(DM, PetscViewer);
 95: PETSC_INTERN PetscErrorCode DMView_DA_VTK(DM, PetscViewer);
 96: PETSC_INTERN PetscErrorCode DMView_DA_GLVis(DM, PetscViewer);
 97: PETSC_EXTERN PetscErrorCode DMDAVTKWriteAll(PetscObject, PetscViewer);
 98: PETSC_EXTERN PetscErrorCode DMDASelectFields(DM, PetscInt *, PetscInt **);

100: #endif