Actual source code: dmmbmg.cxx

  1: #include <petsc/private/dmmbimpl.h>
  2: #include <petscdmmoab.h>
  3: #include <MBTagConventions.hpp>
  4: #include <moab/NestedRefine.hpp>

  6: // A helper function to convert Real vector to Scalar vector (required by MatSetValues)
  7: static inline std::vector<PetscScalar> VecReal_to_VecScalar(const std::vector<PetscReal> &v)
  8: {
  9:   std::vector<PetscScalar> res(v.size());
 10:   for (size_t i = 0; i < res.size(); i++) res[i] = v[i];
 11:   return res;
 12: }

 14: /*@C
 15:   DMMoabGenerateHierarchy - Generate a multi-level uniform refinement hierarchy
 16:   by succesively refining a coarse mesh, already defined in the `DM` object
 17:   provided by the user.

 19:   Collective

 21:   Input Parameter:
 22: . dm - The `DMMOAB` object

 24:   Output Parameters:
 25: + nlevels  - The number of levels of refinement needed to generate the hierarchy
 26: - ldegrees - The degree of refinement at each level in the hierarchy

 28:   Level: beginner

 30: .seealso: `DMMoabCreate()`
 31: @*/
 32: PetscErrorCode DMMoabGenerateHierarchy(DM dm, PetscInt nlevels, PetscInt *ldegrees)
 33: {
 34:   DM_Moab                        *dmmoab;
 35:   PetscInt                       *pdegrees, ilevel;
 36:   std::vector<moab::EntityHandle> hsets;

 38:   PetscFunctionBegin;
 40:   dmmoab = (DM_Moab *)dm->data;

 42:   if (!ldegrees) {
 43:     PetscCall(PetscMalloc1(nlevels, &pdegrees));
 44:     for (ilevel = 0; ilevel < nlevels; ilevel++) pdegrees[ilevel] = 2; /* default = Degree 2 refinement */
 45:   } else pdegrees = ldegrees;

 47:   /* initialize set level refinement data for hierarchy */
 48:   dmmoab->nhlevels = nlevels;

 50:   /* Instantiate the nested refinement class */
 51: #ifdef MOAB_HAVE_MPI
 52:   dmmoab->hierarchy = new moab::NestedRefine(dynamic_cast<moab::Core *>(dmmoab->mbiface), dmmoab->pcomm, dmmoab->fileset);
 53: #else
 54:   dmmoab->hierarchy = new moab::NestedRefine(dynamic_cast<moab::Core *>(dmmoab->mbiface), NULL, dmmoab->fileset);
 55: #endif

 57:   PetscCall(PetscMalloc1(nlevels + 1, &dmmoab->hsets));

 59:   /* generate the mesh hierarchy */
 60:   PetscCallMOAB(dmmoab->hierarchy->generate_mesh_hierarchy(nlevels, pdegrees, hsets, false));

 62: #ifdef MOAB_HAVE_MPI
 63:   if (dmmoab->pcomm->size() > 1) PetscCallMOAB(dmmoab->hierarchy->exchange_ghosts(hsets, dmmoab->nghostrings));
 64: #endif

 66:   /* copy the mesh sets for nested refinement hierarchy */
 67:   dmmoab->hsets[0] = hsets[0];
 68:   for (ilevel = 1; ilevel <= nlevels; ilevel++) {
 69:     dmmoab->hsets[ilevel] = hsets[ilevel];

 71: #ifdef MOAB_HAVE_MPI
 72:     PetscCallMOAB(dmmoab->pcomm->assign_global_ids(hsets[ilevel], dmmoab->dim, 0, false, true, false));
 73: #endif

 75:     /* Update material and other geometric tags from parent to child sets */
 76:     PetscCallMOAB(dmmoab->hierarchy->update_special_tags(ilevel, hsets[ilevel]));
 77:   }

 79:   hsets.clear();
 80:   if (!ldegrees) PetscCall(PetscFree(pdegrees));
 81:   PetscFunctionReturn(PETSC_SUCCESS);
 82: }

 84: // PetscClangLinter pragma ignore: -fdoc-*
 85: /*
 86:   DMRefineHierarchy_Moab - Generate a multi-level `DM` hierarchy
 87:   by succesively refining a coarse mesh.

 89:   Collective

 91:   Input Parameter:
 92: . dm - The `DMMOAB` object

 94:   Output Parameters:
 95: + nlevels - The number of levels of refinement needed to generate the hierarchy
 96: - dmf     - The DM objects after successive refinement of the hierarchy

 98:   Level: beginner
 99: */
100: PETSC_INTERN PetscErrorCode DMRefineHierarchy_Moab(DM dm, PetscInt nlevels, DM dmf[])
101: {
102:   PetscInt i;

104:   PetscFunctionBegin;
105:   PetscCall(DMRefine(dm, PetscObjectComm((PetscObject)dm), &dmf[0]));
106:   for (i = 1; i < nlevels; i++) PetscCall(DMRefine(dmf[i - 1], PetscObjectComm((PetscObject)dm), &dmf[i]));
107:   PetscFunctionReturn(PETSC_SUCCESS);
108: }

110: // PetscClangLinter pragma ignore: -fdoc-*
111: /*
112:   DMCoarsenHierarchy_Moab - Generate a multi-level `DM` hierarchy
113:   by succesively coarsening a refined mesh.

115:   Collective

117:   Input Parameter:
118: . dm - The `DMMOAB` object

120:   Output Parameters:
121: + nlevels - The number of levels of refinement needed to generate the hierarchy
122: - dmc     - The `DM` objects after successive coarsening of the hierarchy

124:   Level: beginner
125: */
126: PETSC_INTERN PetscErrorCode DMCoarsenHierarchy_Moab(DM dm, PetscInt nlevels, DM dmc[])
127: {
128:   PetscInt i;

130:   PetscFunctionBegin;
131:   PetscCall(DMCoarsen(dm, PetscObjectComm((PetscObject)dm), &dmc[0]));
132:   for (i = 1; i < nlevels; i++) PetscCall(DMCoarsen(dmc[i - 1], PetscObjectComm((PetscObject)dm), &dmc[i]));
133:   PetscFunctionReturn(PETSC_SUCCESS);
134: }

136: PETSC_INTERN PetscErrorCode DMMoab_Compute_NNZ_From_Connectivity(DM, PetscInt *, PetscInt *, PetscInt *, PetscInt *, PetscBool);

138: // PetscClangLinter pragma ignore: -fdoc-*
139: /*
140:   DMCreateInterpolation_Moab - Generate the interpolation operators to transform
141:   operators (matrices, vectors) from parent level to child level as defined by
142:   the `DM` inputs provided by the user.

144:   Collective

146:   Input Parameters:
147: + dmp - The `DMMOAB` object
148: - dmc - the second, finer `DMMOAB` object

150:   Output Parameters:
151: + interpl - The interpolation operator for transferring data between the levels
152: - vec     - The scaling vector (optional)

154:   Level: developer
155: */
156: PETSC_INTERN PetscErrorCode DMCreateInterpolation_Moab(DM dmp, DM dmc, Mat *interpl, Vec *vec)
157: {
158:   DM_Moab        *dmbp, *dmbc;
159:   PetscInt        dim;
160:   PetscReal       factor;
161:   PetscInt        innz, *nnz, ionz, *onz;
162:   PetscInt        nlsizp, nlsizc, nlghsizp, ngsizp, ngsizc;
163:   const PetscBool use_consistent_bases = PETSC_TRUE;

165:   PetscFunctionBegin;
168:   dmbp     = (DM_Moab *)dmp->data;
169:   dmbc     = (DM_Moab *)dmc->data;
170:   nlsizp   = dmbp->nloc;                  // *dmb1->numFields;
171:   nlsizc   = dmbc->nloc;                  // *dmb2->numFields;
172:   ngsizp   = dmbp->n;                     // *dmb1->numFields;
173:   ngsizc   = dmbc->n;                     // *dmb2->numFields;
174:   nlghsizp = (dmbp->nloc + dmbp->nghost); // *dmb1->numFields;

176:   // Columns = Parent DoFs ;  Rows = Child DoFs
177:   // Interpolation matrix: \sum_{i=1}^P Owned(Child) * (Owned(Parent) + Ghosted(Parent))
178:   // Size: nlsizc * nlghsizp
179:   PetscCall(PetscInfo(NULL, "Creating interpolation matrix %" PetscInt_FMT " X %" PetscInt_FMT " to apply transformation between levels %" PetscInt_FMT " -> %" PetscInt_FMT ".\n", ngsizc, nlghsizp, dmbp->hlevel, dmbc->hlevel));

181:   PetscCall(DMGetDimension(dmp, &dim));

183:   /* allocate the nnz, onz arrays based on block size and local nodes */
184:   PetscCall(PetscCalloc2(nlsizc, &nnz, nlsizc, &onz));

186:   /* Loop through the local elements and compute the relation between the current parent and the refined_level. */
187:   for (moab::Range::iterator iter = dmbc->vowned->begin(); iter != dmbc->vowned->end(); iter++) {
188:     const moab::EntityHandle vhandle = *iter;
189:     /* define local variables */
190:     moab::EntityHandle              parent;
191:     std::vector<moab::EntityHandle> adjs;
192:     moab::Range                     found;

194:     /* store the vertex DoF number */
195:     const int ldof = dmbc->lidmap[vhandle - dmbc->seqstart];

197:     /* Get adjacency information for current vertex - i.e., all elements of dimension (dim) that connects
198:        to the current vertex. We can then decipher if a vertex is ghosted or not and compute the
199:        non-zero pattern accordingly. */
200:     PetscCallMOAB(dmbc->hierarchy->get_adjacencies(vhandle, dmbc->dim, adjs));

202:     /* loop over vertices and update the number of connectivity */
203:     for (unsigned jter = 0; jter < adjs.size(); jter++) {
204:       const moab::EntityHandle jhandle = adjs[jter];

206:       /* Get the relation between the current (coarse) parent and its corresponding (finer) children elements */
207:       PetscCallMOAB(dmbc->hierarchy->child_to_parent(jhandle, dmbc->hlevel, dmbp->hlevel, &parent));

209:       /* Get connectivity information in canonical ordering for the local element */
210:       std::vector<moab::EntityHandle> connp;
211:       PetscCallMOAB(dmbp->hierarchy->get_connectivity(parent, dmbp->hlevel, connp));

213:       for (unsigned ic = 0; ic < connp.size(); ++ic) {
214:         /* loop over each element connected to the adjacent vertex and update as needed */
215:         /* find the truly user-expected layer of ghosted entities to decipher NNZ pattern */
216:         if (found.find(connp[ic]) != found.end()) continue;                    /* make sure we don't double count shared vertices */
217:         if (dmbp->vghost->find(connp[ic]) != dmbp->vghost->end()) onz[ldof]++; /* update out-of-proc onz */
218:         else nnz[ldof]++;                                                      /* else local vertex */
219:         found.insert(connp[ic]);
220:       }
221:     }
222:   }

224:   for (int i = 0; i < nlsizc; i++) nnz[i] += 1; /* self count the node */

226:   ionz = onz[0];
227:   innz = nnz[0];
228:   for (int tc = 0; tc < nlsizc; tc++) {
229:     // check for maximum allowed sparsity = fully dense
230:     nnz[tc] = std::min(nlsizp, nnz[tc]);
231:     onz[tc] = std::min(ngsizp - nlsizp, onz[tc]);

233:     PetscCall(PetscInfo(NULL, "  %d: NNZ = %d, ONZ = %d\n", tc, nnz[tc], onz[tc]));

235:     innz = (innz < nnz[tc] ? nnz[tc] : innz);
236:     ionz = (ionz < onz[tc] ? onz[tc] : ionz);
237:   }

239:   /* create interpolation matrix */
240:   PetscCall(MatCreate(PetscObjectComm((PetscObject)dmc), interpl));
241:   PetscCall(MatSetSizes(*interpl, nlsizc, nlsizp, ngsizc, ngsizp));
242:   PetscCall(MatSetType(*interpl, MATAIJ));
243:   PetscCall(MatSetFromOptions(*interpl));

245:   PetscCall(MatSeqAIJSetPreallocation(*interpl, innz, nnz));
246:   PetscCall(MatMPIAIJSetPreallocation(*interpl, innz, nnz, ionz, onz));

248:   /* clean up temporary memory */
249:   PetscCall(PetscFree2(nnz, onz));

251:   /* set up internal matrix data-structures */
252:   PetscCall(MatSetUp(*interpl));

254:   /* Define variables for assembly */
255:   std::vector<moab::EntityHandle> children;
256:   std::vector<moab::EntityHandle> connp, connc;
257:   std::vector<PetscReal>          pcoords, ccoords, values_phi;
258:   std::vector<PetscScalar>        values_phi_scalar;

260:   if (use_consistent_bases) {
261:     const moab::EntityHandle ehandle = dmbp->elocal->front();

263:     PetscCallMOAB(dmbp->hierarchy->parent_to_child(ehandle, dmbp->hlevel, dmbc->hlevel, children));

265:     /* Get connectivity and coordinates of the parent vertices */
266:     PetscCallMOAB(dmbp->hierarchy->get_connectivity(ehandle, dmbp->hlevel, connp));
267:     PetscCallMOAB(dmbc->mbiface->get_connectivity(&children[0], children.size(), connc));

269:     std::vector<PetscReal> natparam(3 * connc.size(), 0.0);
270:     pcoords.resize(connp.size() * 3);
271:     ccoords.resize(connc.size() * 3);
272:     values_phi.resize(connp.size() * connc.size());
273:     /* Get coordinates for connectivity entities in canonical order for both coarse and finer levels */
274:     PetscCallMOAB(dmbp->hierarchy->get_coordinates(&connp[0], connp.size(), dmbp->hlevel, &pcoords[0]));
275:     PetscCallMOAB(dmbc->hierarchy->get_coordinates(&connc[0], connc.size(), dmbc->hlevel, &ccoords[0]));

277:     /* Set values: For each DOF in coarse grid cell, set the contribution or PHI evaluated at each fine grid DOF point */
278:     for (unsigned tc = 0; tc < connc.size(); tc++) {
279:       const PetscInt offset = tc * 3;

281:       /* Scale ccoords relative to pcoords */
282:       PetscCall(DMMoabPToRMapping(dim, connp.size(), &pcoords[0], &ccoords[offset], &natparam[offset], &values_phi[connp.size() * tc]));
283:     }
284:   } else {
285:     factor = std::pow(2.0 /*degree_P_for_refinement*/, (dmbc->hlevel - dmbp->hlevel) * dmbp->dim * 1.0);
286:   }

288:   /* TODO: Decipher the correct non-zero pattern. There is still some issue with onz allocation */
289:   PetscCall(MatSetOption(*interpl, MAT_NEW_NONZERO_ALLOCATION_ERR, PETSC_FALSE));

291:   /* Loop through the remaining vertices. These vertices appear only on the current refined_level. */
292:   values_phi_scalar = VecReal_to_VecScalar(values_phi);
293:   for (moab::Range::iterator iter = dmbp->elocal->begin(); iter != dmbp->elocal->end(); iter++) {
294:     const moab::EntityHandle ehandle = *iter;

296:     /* Get the relation between the current (coarse) parent and its corresponding (finer) children elements */
297:     children.clear();
298:     connc.clear();
299:     PetscCallMOAB(dmbp->hierarchy->parent_to_child(ehandle, dmbp->hlevel, dmbc->hlevel, children));

301:     /* Get connectivity and coordinates of the parent vertices */
302:     PetscCallMOAB(dmbp->hierarchy->get_connectivity(ehandle, dmbp->hlevel, connp));
303:     PetscCallMOAB(dmbc->mbiface->get_connectivity(&children[0], children.size(), connc));

305:     pcoords.resize(connp.size() * 3);
306:     ccoords.resize(connc.size() * 3);
307:     /* Get coordinates for connectivity entities in canonical order for both coarse and finer levels */
308:     PetscCallMOAB(dmbp->hierarchy->get_coordinates(&connp[0], connp.size(), dmbp->hlevel, &pcoords[0]));
309:     PetscCallMOAB(dmbc->hierarchy->get_coordinates(&connc[0], connc.size(), dmbc->hlevel, &ccoords[0]));

311:     std::vector<int> dofsp(connp.size()), dofsc(connc.size());
312:     /* TODO: specific to scalar system - use GetDofs */
313:     PetscCall(DMMoabGetDofsBlocked(dmp, connp.size(), &connp[0], &dofsp[0]));
314:     PetscCall(DMMoabGetDofsBlocked(dmc, connc.size(), &connc[0], &dofsc[0]));

316:     /* Compute the actual interpolation weights when projecting solution/residual between levels */
317:     if (use_consistent_bases) {
318:       /* Use the cached values of natural parametric coordinates and basis pre-evaluated.
319:          We are making an assumption here that UMR used in GMG to generate the hierarchy uses
320:          the same template for all elements; This will fail for mixed element meshes (TRI/QUAD).

322:          TODO: Fix the above assumption by caching data for families (especially for Tets and mixed meshes)
323:       */

325:       /* Set values: For each DOF in coarse grid cell, set the contribution or PHI evaluated at each fine grid DOF point */
326:       for (unsigned tc = 0; tc < connc.size(); tc++) {
327:         /* TODO: Check if we should be using INSERT_VALUES instead */
328:         PetscCall(MatSetValues(*interpl, 1, &dofsc[tc], connp.size(), &dofsp[0], &values_phi_scalar[connp.size() * tc], ADD_VALUES));
329:       }
330:     } else {
331:       /* Compute the interpolation weights by determining distance of 1-ring
332:          neighbor vertices from current vertex

334:          This should be used only when FEM basis is not used for the discretization.
335:          Else, the consistent interface to compute the basis function for interpolation
336:          between the levels should be evaluated correctly to preserve convergence of GMG.
337:          Shephard's basis will be terrible for any unsmooth problems.
338:       */
339:       values_phi.resize(connp.size());
340:       for (unsigned tc = 0; tc < connc.size(); tc++) {
341:         PetscReal                normsum = 0.0;
342:         std::vector<PetscScalar> values_phi_scalar2;
343:         for (unsigned tp = 0; tp < connp.size(); tp++) {
344:           values_phi[tp] = 0.0;
345:           for (unsigned k = 0; k < 3; k++) values_phi[tp] += std::pow(pcoords[tp * 3 + k] - ccoords[k + tc * 3], dim);
346:           if (values_phi[tp] < 1e-12) {
347:             values_phi[tp] = 1e12;
348:           } else {
349:             //values_phi[tp] = std::pow(values_phi[tp], -1.0/dim);
350:             values_phi[tp] = std::pow(values_phi[tp], -1.0);
351:             normsum += values_phi[tp];
352:           }
353:         }
354:         for (unsigned tp = 0; tp < connp.size(); tp++) {
355:           if (values_phi[tp] > 1e11) values_phi[tp] = factor * 0.5 / connp.size();
356:           else values_phi[tp] = factor * values_phi[tp] * 0.5 / (connp.size() * normsum);
357:         }
358:         values_phi_scalar2 = VecReal_to_VecScalar(values_phi);
359:         PetscCall(MatSetValues(*interpl, 1, &dofsc[tc], connp.size(), &dofsp[0], &values_phi_scalar2[0], ADD_VALUES));
360:       }
361:     }
362:   }
363:   if (vec) *vec = NULL; // TODO: <-- is it safe/appropriate?
364:   PetscCall(MatAssemblyBegin(*interpl, MAT_FINAL_ASSEMBLY));
365:   PetscCall(MatAssemblyEnd(*interpl, MAT_FINAL_ASSEMBLY));
366:   PetscFunctionReturn(PETSC_SUCCESS);
367: }

369: // PetscClangLinter pragma ignore: -fdoc-*
370: /*
371:   DMCreateInjection_Moab - Generate a multi-level uniform refinement hierarchy
372:   by succesively refining a coarse mesh, already defined in the `DM` object
373:   provided by the user.

375:   Collective

377:   Input Parameter:
378: . dmb  - The `DMMOAB` object

380:   Output Parameters:
381: + nlevels   - The number of levels of refinement needed to generate the hierarchy
382: - ldegrees  - The degree of refinement at each level in the hierarchy

384:   Level: beginner
385: */
386: PETSC_INTERN PetscErrorCode DMCreateInjection_Moab(DM dm1, DM dm2, VecScatter *ctx)
387: {
388:   PetscFunctionBegin;
391:   PetscCall(PetscPrintf(PETSC_COMM_WORLD, "[DMCreateInjection_Moab] :: Placeholder\n"));
392:   PetscFunctionReturn(PETSC_SUCCESS);
393: }

395: static PetscErrorCode DMMoab_UMR_Private(DM dm, MPI_Comm comm, PetscBool refine, DM *dmref)
396: {
397:   PetscInt i, dim;
398:   DM       dm2;
399:   DM_Moab *dmb = (DM_Moab *)dm->data, *dd2;

401:   PetscFunctionBegin;
403:   PetscAssertPointer(dmref, 4);

405:   if ((dmb->hlevel == dmb->nhlevels && refine) || (dmb->hlevel == 0 && !refine)) {
406:     if (dmb->hlevel + 1 > dmb->nhlevels && refine) {
407:       PetscCall(PetscInfo(NULL, "Invalid multigrid refinement hierarchy level specified (%" PetscInt_FMT "). MOAB UMR max levels = %" PetscInt_FMT ". Creating a NULL object.\n", dmb->hlevel + 1, dmb->nhlevels));
408:     }
409:     if (dmb->hlevel - 1 < 0 && !refine) PetscCall(PetscInfo(NULL, "Invalid multigrid coarsen hierarchy level specified (%" PetscInt_FMT "). Creating a NULL object.\n", dmb->hlevel - 1));
410:     *dmref = NULL;
411:     PetscFunctionReturn(PETSC_SUCCESS);
412:   }

414:   PetscCall(DMMoabCreate(PetscObjectComm((PetscObject)dm), &dm2));
415:   dd2 = (DM_Moab *)dm2->data;

417:   dd2->mbiface = dmb->mbiface;
418: #ifdef MOAB_HAVE_MPI
419:   dd2->pcomm = dmb->pcomm;
420: #endif
421:   dd2->icreatedinstance = PETSC_FALSE;
422:   dd2->nghostrings      = dmb->nghostrings;

424:   /* set the new level based on refinement/coarsening */
425:   if (refine) {
426:     dd2->hlevel = dmb->hlevel + 1;
427:   } else {
428:     dd2->hlevel = dmb->hlevel - 1;
429:   }

431:   /* Copy the multilevel hierarchy pointers in MOAB */
432:   dd2->hierarchy = dmb->hierarchy;
433:   dd2->nhlevels  = dmb->nhlevels;
434:   PetscCall(PetscMalloc1(dd2->nhlevels + 1, &dd2->hsets));
435:   for (i = 0; i <= dd2->nhlevels; i++) dd2->hsets[i] = dmb->hsets[i];
436:   dd2->fileset = dd2->hsets[dd2->hlevel];

438:   /* do the remaining initializations for DMMoab */
439:   dd2->bs                = dmb->bs;
440:   dd2->numFields         = dmb->numFields;
441:   dd2->rw_dbglevel       = dmb->rw_dbglevel;
442:   dd2->partition_by_rank = dmb->partition_by_rank;
443:   PetscCall(PetscStrncpy(dd2->extra_read_options, dmb->extra_read_options, sizeof(dd2->extra_read_options)));
444:   PetscCall(PetscStrncpy(dd2->extra_write_options, dmb->extra_write_options, sizeof(dd2->extra_write_options)));
445:   dd2->read_mode  = dmb->read_mode;
446:   dd2->write_mode = dmb->write_mode;

448:   /* set global ID tag handle */
449:   PetscCall(DMMoabSetLocalToGlobalTag(dm2, dmb->ltog_tag));

451:   PetscCallMOAB(dd2->mbiface->tag_get_handle(MATERIAL_SET_TAG_NAME, dd2->material_tag));

453:   PetscCall(DMSetOptionsPrefix(dm2, ((PetscObject)dm)->prefix));
454:   PetscCall(DMGetDimension(dm, &dim));
455:   PetscCall(DMSetDimension(dm2, dim));

457:   /* allow overloaded (user replaced) operations to be inherited by refinement clones */
458:   dm2->ops->creatematrix = dm->ops->creatematrix;

460:   /* copy fill information if given */
461:   PetscCall(DMMoabSetBlockFills(dm2, dmb->dfill, dmb->ofill));

463:   /* copy vector type information */
464:   PetscCall(DMSetMatType(dm2, dm->mattype));
465:   PetscCall(DMSetVecType(dm2, dm->vectype));
466:   dd2->numFields = dmb->numFields;
467:   if (dmb->numFields) PetscCall(DMMoabSetFieldNames(dm2, dmb->numFields, dmb->fieldNames));

469:   PetscCall(DMSetFromOptions(dm2));

471:   /* recreate Dof numbering for the refined DM and make sure the distribution is correctly populated */
472:   PetscCall(DMSetUp(dm2));

474:   *dmref = dm2;
475:   PetscFunctionReturn(PETSC_SUCCESS);
476: }

478: // PetscClangLinter pragma ignore: -fdoc-*
479: /*
480:   DMRefine_Moab - Generate a multi-level uniform refinement hierarchy
481:   by succesively refining a coarse mesh, already defined in the `DM` object
482:   provided by the user.

484:   Collective

486:   Input Parameters:
487: + dm   - The `DMMOAB` object
488: - comm - the communicator to contain the new DM object (or `MPI_COMM_NULL`)

490:   Output Parameter:
491: . dmf - the refined `DM`, or `NULL`

493:   Level: developer

495:   Note:
496:   If no refinement was done, the return value is `NULL`
497: */
498: PETSC_INTERN PetscErrorCode DMRefine_Moab(DM dm, MPI_Comm comm, DM *dmf)
499: {
500:   PetscFunctionBegin;

503:   PetscCall(DMMoab_UMR_Private(dm, comm, PETSC_TRUE, dmf));
504:   PetscFunctionReturn(PETSC_SUCCESS);
505: }

507: // PetscClangLinter pragma ignore: -fdoc-*
508: /*
509:   DMCoarsen_Moab - Generate a multi-level uniform refinement hierarchy
510:   by succesively refining a coarse mesh, already defined in the `DM` object
511:   provided by the user.

513:   Collective

515:   Input Parameters:
516: + dm   - The `DMMOAB` object
517: - comm - the communicator to contain the new `DM` object (or `MPI_COMM_NULL`)

519:   Output Parameter:
520: . dmc - the coarsened `DM`, or `NULL`

522:   Level: developer

524:   Note:
525:   If no coarsening was done, the return value is `NULL`
526: */
527: PETSC_INTERN PetscErrorCode DMCoarsen_Moab(DM dm, MPI_Comm comm, DM *dmc)
528: {
529:   PetscFunctionBegin;
531:   PetscCall(DMMoab_UMR_Private(dm, comm, PETSC_FALSE, dmc));
532:   PetscFunctionReturn(PETSC_SUCCESS);
533: }