Actual source code: mpidense.c
1: /*
2: Basic functions for basic parallel dense matrices.
3: Portions of this code are under:
4: Copyright (c) 2022 Advanced Micro Devices, Inc. All rights reserved.
5: */
7: #include <../src/mat/impls/dense/mpi/mpidense.h>
8: #include <../src/mat/impls/aij/mpi/mpiaij.h>
9: #include <petscblaslapack.h>
10: #include <petsc/private/vecimpl.h>
11: #include <petscdevice.h>
12: #include <petsc/private/deviceimpl.h>
14: /*@
15: MatDenseGetLocalMatrix - For a `MATMPIDENSE` or `MATSEQDENSE` matrix returns the sequential
16: matrix that represents the operator. For sequential matrices it returns itself.
18: Input Parameter:
19: . A - the sequential or MPI `MATDENSE` matrix
21: Output Parameter:
22: . B - the inner matrix
24: Level: intermediate
26: .seealso: [](ch_matrices), `Mat`, `MATDENSE`, `MATMPIDENSE`, `MATSEQDENSE`
27: @*/
28: PetscErrorCode MatDenseGetLocalMatrix(Mat A, Mat *B)
29: {
30: Mat_MPIDense *mat = (Mat_MPIDense *)A->data;
31: PetscBool flg;
33: PetscFunctionBegin;
35: PetscAssertPointer(B, 2);
36: PetscCall(PetscObjectBaseTypeCompare((PetscObject)A, MATMPIDENSE, &flg));
37: if (flg) *B = mat->A;
38: else {
39: PetscCall(PetscObjectBaseTypeCompare((PetscObject)A, MATSEQDENSE, &flg));
40: PetscCheck(flg, PetscObjectComm((PetscObject)A), PETSC_ERR_SUP, "Not for matrix type %s", ((PetscObject)A)->type_name);
41: *B = A;
42: }
43: PetscFunctionReturn(PETSC_SUCCESS);
44: }
46: static PetscErrorCode MatCopy_MPIDense(Mat A, Mat B, MatStructure s)
47: {
48: Mat_MPIDense *Amat = (Mat_MPIDense *)A->data;
49: Mat_MPIDense *Bmat = (Mat_MPIDense *)B->data;
51: PetscFunctionBegin;
52: PetscCall(MatCopy(Amat->A, Bmat->A, s));
53: PetscFunctionReturn(PETSC_SUCCESS);
54: }
56: PetscErrorCode MatShift_MPIDense(Mat A, PetscScalar alpha)
57: {
58: Mat_MPIDense *mat = (Mat_MPIDense *)A->data;
59: PetscInt j, lda, rstart = A->rmap->rstart, rend = A->rmap->rend, rend2;
60: PetscScalar *v;
62: PetscFunctionBegin;
63: PetscCall(MatDenseGetArray(mat->A, &v));
64: PetscCall(MatDenseGetLDA(mat->A, &lda));
65: rend2 = PetscMin(rend, A->cmap->N);
66: if (rend2 > rstart) {
67: for (j = rstart; j < rend2; j++) v[j - rstart + j * lda] += alpha;
68: PetscCall(PetscLogFlops(rend2 - rstart));
69: }
70: PetscCall(MatDenseRestoreArray(mat->A, &v));
71: PetscFunctionReturn(PETSC_SUCCESS);
72: }
74: static PetscErrorCode MatGetRow_MPIDense(Mat A, PetscInt row, PetscInt *nz, PetscInt **idx, PetscScalar **v)
75: {
76: Mat_MPIDense *mat = (Mat_MPIDense *)A->data;
77: PetscInt lrow, rstart = A->rmap->rstart, rend = A->rmap->rend;
79: PetscFunctionBegin;
80: PetscCheck(row >= rstart && row < rend, PETSC_COMM_SELF, PETSC_ERR_SUP, "only local rows");
81: lrow = row - rstart;
82: PetscCall(MatGetRow(mat->A, lrow, nz, (const PetscInt **)idx, (const PetscScalar **)v));
83: PetscFunctionReturn(PETSC_SUCCESS);
84: }
86: static PetscErrorCode MatRestoreRow_MPIDense(Mat A, PetscInt row, PetscInt *nz, PetscInt **idx, PetscScalar **v)
87: {
88: Mat_MPIDense *mat = (Mat_MPIDense *)A->data;
89: PetscInt lrow, rstart = A->rmap->rstart, rend = A->rmap->rend;
91: PetscFunctionBegin;
92: PetscCheck(row >= rstart && row < rend, PETSC_COMM_SELF, PETSC_ERR_SUP, "only local rows");
93: lrow = row - rstart;
94: PetscCall(MatRestoreRow(mat->A, lrow, nz, (const PetscInt **)idx, (const PetscScalar **)v));
95: PetscFunctionReturn(PETSC_SUCCESS);
96: }
98: static PetscErrorCode MatGetDiagonalBlock_MPIDense(Mat A, Mat *a)
99: {
100: Mat_MPIDense *mdn = (Mat_MPIDense *)A->data;
101: PetscInt m = A->rmap->n, rstart = A->rmap->rstart;
102: PetscScalar *array;
103: MPI_Comm comm;
104: PetscBool flg;
105: Mat B;
107: PetscFunctionBegin;
108: PetscCall(MatHasCongruentLayouts(A, &flg));
109: PetscCheck(flg, PETSC_COMM_SELF, PETSC_ERR_SUP, "Only square matrices supported.");
110: PetscCall(PetscObjectQuery((PetscObject)A, "DiagonalBlock", (PetscObject *)&B));
111: if (!B) { /* This should use MatDenseGetSubMatrix (not create), but we would need a call like MatRestoreDiagonalBlock */
112: #if PetscDefined(HAVE_CUDA)
113: PetscCall(PetscObjectTypeCompare((PetscObject)mdn->A, MATSEQDENSECUDA, &flg));
114: PetscCheck(!flg, PETSC_COMM_SELF, PETSC_ERR_SUP, "Not coded for %s. Send an email to petsc-dev@mcs.anl.gov to request this feature", MATSEQDENSECUDA);
115: #elif PetscDefined(HAVE_HIP)
116: PetscCall(PetscObjectTypeCompare((PetscObject)mdn->A, MATSEQDENSEHIP, &flg));
117: PetscCheck(!flg, PETSC_COMM_SELF, PETSC_ERR_SUP, "Not coded for %s. Send an email to petsc-dev@mcs.anl.gov to request this feature", MATSEQDENSEHIP);
118: #endif
119: PetscCall(PetscObjectGetComm((PetscObject)mdn->A, &comm));
120: PetscCall(MatCreate(comm, &B));
121: PetscCall(MatSetSizes(B, m, m, m, m));
122: PetscCall(MatSetType(B, ((PetscObject)mdn->A)->type_name));
123: PetscCall(MatDenseGetArrayRead(mdn->A, (const PetscScalar **)&array));
124: PetscCall(MatSeqDenseSetPreallocation(B, array + m * rstart));
125: PetscCall(MatDenseRestoreArrayRead(mdn->A, (const PetscScalar **)&array));
126: PetscCall(PetscObjectCompose((PetscObject)A, "DiagonalBlock", (PetscObject)B));
127: *a = B;
128: PetscCall(MatDestroy(&B));
129: } else *a = B;
130: PetscFunctionReturn(PETSC_SUCCESS);
131: }
133: static PetscErrorCode MatSetValues_MPIDense(Mat mat, PetscInt m, const PetscInt idxm[], PetscInt n, const PetscInt idxn[], const PetscScalar v[], InsertMode addv)
134: {
135: Mat_MPIDense *A = (Mat_MPIDense *)mat->data;
136: PetscInt i, j, rstart = mat->rmap->rstart, rend = mat->rmap->rend, row;
137: PetscBool roworiented = A->roworiented;
139: PetscFunctionBegin;
140: for (i = 0; i < m; i++) {
141: if (idxm[i] < 0) continue;
142: PetscCheck(idxm[i] < mat->rmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Row too large");
143: if (idxm[i] >= rstart && idxm[i] < rend) {
144: row = idxm[i] - rstart;
145: if (roworiented) {
146: PetscCall(MatSetValues(A->A, 1, &row, n, idxn, PetscSafePointerPlusOffset(v, i * n), addv));
147: } else {
148: for (j = 0; j < n; j++) {
149: if (idxn[j] < 0) continue;
150: PetscCheck(idxn[j] < mat->cmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Column too large");
151: PetscCall(MatSetValues(A->A, 1, &row, 1, &idxn[j], PetscSafePointerPlusOffset(v, i + j * m), addv));
152: }
153: }
154: } else if (!A->donotstash) {
155: mat->assembled = PETSC_FALSE;
156: if (roworiented) {
157: PetscCall(MatStashValuesRow_Private(&mat->stash, idxm[i], n, idxn, PetscSafePointerPlusOffset(v, i * n), PETSC_FALSE));
158: } else {
159: PetscCall(MatStashValuesCol_Private(&mat->stash, idxm[i], n, idxn, PetscSafePointerPlusOffset(v, i), m, PETSC_FALSE));
160: }
161: }
162: }
163: PetscFunctionReturn(PETSC_SUCCESS);
164: }
166: static PetscErrorCode MatGetValues_MPIDense(Mat mat, PetscInt m, const PetscInt idxm[], PetscInt n, const PetscInt idxn[], PetscScalar v[])
167: {
168: Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data;
169: PetscInt i, j, rstart = mat->rmap->rstart, rend = mat->rmap->rend, row;
171: PetscFunctionBegin;
172: for (i = 0; i < m; i++) {
173: if (idxm[i] < 0) continue; /* negative row */
174: PetscCheck(idxm[i] < mat->rmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Row too large");
175: PetscCheck(idxm[i] >= rstart && idxm[i] < rend, PETSC_COMM_SELF, PETSC_ERR_SUP, "Only local values currently supported");
176: row = idxm[i] - rstart;
177: for (j = 0; j < n; j++) {
178: if (idxn[j] < 0) continue; /* negative column */
179: PetscCheck(idxn[j] < mat->cmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Column too large");
180: PetscCall(MatGetValues(mdn->A, 1, &row, 1, &idxn[j], v + i * n + j));
181: }
182: }
183: PetscFunctionReturn(PETSC_SUCCESS);
184: }
186: static PetscErrorCode MatDenseGetLDA_MPIDense(Mat A, PetscInt *lda)
187: {
188: Mat_MPIDense *a = (Mat_MPIDense *)A->data;
190: PetscFunctionBegin;
191: PetscCall(MatDenseGetLDA(a->A, lda));
192: PetscFunctionReturn(PETSC_SUCCESS);
193: }
195: static PetscErrorCode MatDenseSetLDA_MPIDense(Mat A, PetscInt lda)
196: {
197: Mat_MPIDense *a = (Mat_MPIDense *)A->data;
198: MatType mtype = MATSEQDENSE;
200: PetscFunctionBegin;
201: if (!a->A) {
202: PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first");
203: PetscCall(PetscLayoutSetUp(A->rmap));
204: PetscCall(PetscLayoutSetUp(A->cmap));
205: PetscCall(MatCreate(PETSC_COMM_SELF, &a->A));
206: PetscCall(MatSetSizes(a->A, A->rmap->n, A->cmap->N, A->rmap->n, A->cmap->N));
207: #if PetscDefined(HAVE_CUDA)
208: PetscBool iscuda;
209: PetscCall(PetscObjectTypeCompare((PetscObject)A, MATMPIDENSECUDA, &iscuda));
210: if (iscuda) mtype = MATSEQDENSECUDA;
211: #elif PetscDefined(HAVE_HIP)
212: PetscBool iship;
213: PetscCall(PetscObjectTypeCompare((PetscObject)A, MATMPIDENSEHIP, &iship));
214: if (iship) mtype = MATSEQDENSEHIP;
215: #endif
216: PetscCall(MatSetType(a->A, mtype));
217: }
218: PetscCall(MatDenseSetLDA(a->A, lda));
219: PetscFunctionReturn(PETSC_SUCCESS);
220: }
222: static PetscErrorCode MatDenseGetArray_MPIDense(Mat A, PetscScalar **array)
223: {
224: Mat_MPIDense *a = (Mat_MPIDense *)A->data;
226: PetscFunctionBegin;
227: PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first");
228: PetscCall(MatDenseGetArray(a->A, array));
229: PetscFunctionReturn(PETSC_SUCCESS);
230: }
232: static PetscErrorCode MatDenseGetArrayRead_MPIDense(Mat A, PetscScalar **array)
233: {
234: Mat_MPIDense *a = (Mat_MPIDense *)A->data;
236: PetscFunctionBegin;
237: PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first");
238: PetscCall(MatDenseGetArrayRead(a->A, (const PetscScalar **)array));
239: PetscFunctionReturn(PETSC_SUCCESS);
240: }
242: static PetscErrorCode MatDenseGetArrayWrite_MPIDense(Mat A, PetscScalar **array)
243: {
244: Mat_MPIDense *a = (Mat_MPIDense *)A->data;
246: PetscFunctionBegin;
247: PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first");
248: PetscCall(MatDenseGetArrayWrite(a->A, array));
249: PetscFunctionReturn(PETSC_SUCCESS);
250: }
252: static PetscErrorCode MatDensePlaceArray_MPIDense(Mat A, const PetscScalar *array)
253: {
254: Mat_MPIDense *a = (Mat_MPIDense *)A->data;
256: PetscFunctionBegin;
257: PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first");
258: PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first");
259: PetscCall(MatDensePlaceArray(a->A, array));
260: PetscFunctionReturn(PETSC_SUCCESS);
261: }
263: static PetscErrorCode MatDenseResetArray_MPIDense(Mat A)
264: {
265: Mat_MPIDense *a = (Mat_MPIDense *)A->data;
267: PetscFunctionBegin;
268: PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first");
269: PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first");
270: PetscCall(MatDenseResetArray(a->A));
271: PetscFunctionReturn(PETSC_SUCCESS);
272: }
274: static PetscErrorCode MatDenseReplaceArray_MPIDense(Mat A, const PetscScalar *array)
275: {
276: Mat_MPIDense *a = (Mat_MPIDense *)A->data;
278: PetscFunctionBegin;
279: PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first");
280: PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first");
281: PetscCall(MatDenseReplaceArray(a->A, array));
282: PetscFunctionReturn(PETSC_SUCCESS);
283: }
285: static PetscErrorCode MatCreateSubMatrix_MPIDense(Mat A, IS isrow, IS iscol, MatReuse scall, Mat *B)
286: {
287: Mat_MPIDense *mat = (Mat_MPIDense *)A->data, *newmatd;
288: PetscInt lda, i, j, rstart, rend, nrows, ncols, Ncols, nlrows, nlcols;
289: const PetscInt *irow, *icol;
290: const PetscScalar *v;
291: PetscScalar *bv;
292: Mat newmat;
293: IS iscol_local;
294: MPI_Comm comm_is, comm_mat;
296: PetscFunctionBegin;
297: PetscCall(PetscObjectGetComm((PetscObject)A, &comm_mat));
298: PetscCall(PetscObjectGetComm((PetscObject)iscol, &comm_is));
299: PetscCheck(comm_mat == comm_is, PETSC_COMM_SELF, PETSC_ERR_ARG_NOTSAMECOMM, "IS communicator must match matrix communicator");
301: PetscCall(ISAllGather(iscol, &iscol_local));
302: PetscCall(ISGetIndices(isrow, &irow));
303: PetscCall(ISGetIndices(iscol_local, &icol));
304: PetscCall(ISGetLocalSize(isrow, &nrows));
305: PetscCall(ISGetLocalSize(iscol, &ncols));
306: PetscCall(ISGetSize(iscol, &Ncols)); /* global number of columns, size of iscol_local */
308: /* No parallel redistribution currently supported! Should really check each index set
309: to confirm that it is OK. ... Currently supports only submatrix same partitioning as
310: original matrix! */
312: PetscCall(MatGetLocalSize(A, &nlrows, &nlcols));
313: PetscCall(MatGetOwnershipRange(A, &rstart, &rend));
315: /* Check submatrix call */
316: if (scall == MAT_REUSE_MATRIX) {
317: /* SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Reused submatrix wrong size"); */
318: /* Really need to test rows and column sizes! */
319: newmat = *B;
320: } else {
321: /* Create and fill new matrix */
322: PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &newmat));
323: PetscCall(MatSetSizes(newmat, nrows, ncols, PETSC_DECIDE, Ncols));
324: PetscCall(MatSetType(newmat, ((PetscObject)A)->type_name));
325: PetscCall(MatMPIDenseSetPreallocation(newmat, NULL));
326: }
328: /* Now extract the data pointers and do the copy, column at a time */
329: newmatd = (Mat_MPIDense *)newmat->data;
330: PetscCall(MatDenseGetArray(newmatd->A, &bv));
331: PetscCall(MatDenseGetArrayRead(mat->A, &v));
332: PetscCall(MatDenseGetLDA(mat->A, &lda));
333: for (i = 0; i < Ncols; i++) {
334: const PetscScalar *av = v + lda * icol[i];
335: for (j = 0; j < nrows; j++) *bv++ = av[irow[j] - rstart];
336: }
337: PetscCall(MatDenseRestoreArrayRead(mat->A, &v));
338: PetscCall(MatDenseRestoreArray(newmatd->A, &bv));
340: /* Assemble the matrices so that the correct flags are set */
341: PetscCall(MatAssemblyBegin(newmat, MAT_FINAL_ASSEMBLY));
342: PetscCall(MatAssemblyEnd(newmat, MAT_FINAL_ASSEMBLY));
344: /* Free work space */
345: PetscCall(ISRestoreIndices(isrow, &irow));
346: PetscCall(ISRestoreIndices(iscol_local, &icol));
347: PetscCall(ISDestroy(&iscol_local));
348: *B = newmat;
349: PetscFunctionReturn(PETSC_SUCCESS);
350: }
352: static PetscErrorCode MatDenseRestoreArray_MPIDense(Mat A, PetscScalar **array)
353: {
354: Mat_MPIDense *a = (Mat_MPIDense *)A->data;
356: PetscFunctionBegin;
357: PetscCall(MatDenseRestoreArray(a->A, array));
358: PetscFunctionReturn(PETSC_SUCCESS);
359: }
361: static PetscErrorCode MatDenseRestoreArrayRead_MPIDense(Mat A, PetscScalar **array)
362: {
363: Mat_MPIDense *a = (Mat_MPIDense *)A->data;
365: PetscFunctionBegin;
366: PetscCall(MatDenseRestoreArrayRead(a->A, (const PetscScalar **)array));
367: PetscFunctionReturn(PETSC_SUCCESS);
368: }
370: static PetscErrorCode MatDenseRestoreArrayWrite_MPIDense(Mat A, PetscScalar **array)
371: {
372: Mat_MPIDense *a = (Mat_MPIDense *)A->data;
374: PetscFunctionBegin;
375: PetscCall(MatDenseRestoreArrayWrite(a->A, array));
376: PetscFunctionReturn(PETSC_SUCCESS);
377: }
379: static PetscErrorCode MatAssemblyBegin_MPIDense(Mat mat, MatAssemblyType mode)
380: {
381: Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data;
382: PetscInt nstash, reallocs;
384: PetscFunctionBegin;
385: if (mdn->donotstash || mat->nooffprocentries) PetscFunctionReturn(PETSC_SUCCESS);
387: PetscCall(MatStashScatterBegin_Private(mat, &mat->stash, mat->rmap->range));
388: PetscCall(MatStashGetInfo_Private(&mat->stash, &nstash, &reallocs));
389: PetscCall(PetscInfo(mdn->A, "Stash has %" PetscInt_FMT " entries, uses %" PetscInt_FMT " mallocs.\n", nstash, reallocs));
390: PetscFunctionReturn(PETSC_SUCCESS);
391: }
393: static PetscErrorCode MatAssemblyEnd_MPIDense(Mat mat, MatAssemblyType mode)
394: {
395: Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data;
396: PetscInt i, *row, *col, flg, j, rstart, ncols;
397: PetscMPIInt n;
398: PetscScalar *val;
400: PetscFunctionBegin;
401: if (!mdn->donotstash && !mat->nooffprocentries) {
402: /* wait on receives */
403: while (1) {
404: PetscCall(MatStashScatterGetMesg_Private(&mat->stash, &n, &row, &col, &val, &flg));
405: if (!flg) break;
407: for (i = 0; i < n;) {
408: /* Now identify the consecutive vals belonging to the same row */
409: for (j = i, rstart = row[j]; j < n; j++) {
410: if (row[j] != rstart) break;
411: }
412: if (j < n) ncols = j - i;
413: else ncols = n - i;
414: /* Now assemble all these values with a single function call */
415: PetscCall(MatSetValues_MPIDense(mat, 1, row + i, ncols, col + i, val + i, mat->insertmode));
416: i = j;
417: }
418: }
419: PetscCall(MatStashScatterEnd_Private(&mat->stash));
420: }
422: PetscCall(MatAssemblyBegin(mdn->A, mode));
423: PetscCall(MatAssemblyEnd(mdn->A, mode));
424: PetscFunctionReturn(PETSC_SUCCESS);
425: }
427: static PetscErrorCode MatZeroEntries_MPIDense(Mat A)
428: {
429: Mat_MPIDense *l = (Mat_MPIDense *)A->data;
431: PetscFunctionBegin;
432: PetscCall(MatZeroEntries(l->A));
433: PetscFunctionReturn(PETSC_SUCCESS);
434: }
436: static PetscErrorCode MatZeroRows_MPIDense(Mat A, PetscInt n, const PetscInt rows[], PetscScalar diag, Vec x, Vec b)
437: {
438: Mat_MPIDense *l = (Mat_MPIDense *)A->data;
439: PetscInt i, len, *lrows;
441: PetscFunctionBegin;
442: /* get locally owned rows */
443: PetscCall(PetscLayoutMapLocal(A->rmap, n, rows, &len, &lrows, NULL));
444: /* fix right-hand side if needed */
445: if (x && b) {
446: const PetscScalar *xx;
447: PetscScalar *bb;
449: PetscCall(VecGetArrayRead(x, &xx));
450: PetscCall(VecGetArrayWrite(b, &bb));
451: for (i = 0; i < len; ++i) bb[lrows[i]] = diag * xx[lrows[i]];
452: PetscCall(VecRestoreArrayRead(x, &xx));
453: PetscCall(VecRestoreArrayWrite(b, &bb));
454: }
455: PetscCall(MatZeroRows(l->A, len, lrows, 0.0, NULL, NULL));
456: if (diag != 0.0) {
457: Vec d;
459: PetscCall(MatCreateVecs(A, NULL, &d));
460: PetscCall(VecSet(d, diag));
461: PetscCall(MatDiagonalSet(A, d, INSERT_VALUES));
462: PetscCall(VecDestroy(&d));
463: }
464: PetscCall(PetscFree(lrows));
465: PetscFunctionReturn(PETSC_SUCCESS);
466: }
468: PETSC_INTERN PetscErrorCode MatMult_SeqDense(Mat, Vec, Vec);
469: PETSC_INTERN PetscErrorCode MatMultAdd_SeqDense(Mat, Vec, Vec, Vec);
470: PETSC_INTERN PetscErrorCode MatMultTranspose_SeqDense(Mat, Vec, Vec);
471: PETSC_INTERN PetscErrorCode MatMultTransposeAdd_SeqDense(Mat, Vec, Vec, Vec);
473: static PetscErrorCode MatMultColumnRange_MPIDense(Mat mat, Vec xx, Vec yy, PetscInt c_start, PetscInt c_end)
474: {
475: Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data;
476: const PetscScalar *ax;
477: PetscScalar *ay;
478: PetscMemType axmtype, aymtype;
480: PetscFunctionBegin;
481: if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(mat));
482: PetscCall(VecGetArrayReadAndMemType(xx, &ax, &axmtype));
483: PetscCall(VecGetArrayWriteAndMemType(mdn->lvec, &ay, &aymtype));
484: PetscCall(PetscSFBcastWithMemTypeBegin(mdn->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPI_REPLACE));
485: PetscCall(PetscSFBcastEnd(mdn->Mvctx, MPIU_SCALAR, ax, ay, MPI_REPLACE));
486: PetscCall(VecRestoreArrayWriteAndMemType(mdn->lvec, &ay));
487: PetscCall(VecRestoreArrayReadAndMemType(xx, &ax));
488: PetscUseMethod(mdn->A, "MatMultColumnRange_C", (Mat, Vec, Vec, PetscInt, PetscInt), (mdn->A, mdn->lvec, yy, c_start, c_end));
489: PetscFunctionReturn(PETSC_SUCCESS);
490: }
492: static PetscErrorCode MatMult_MPIDense(Mat mat, Vec xx, Vec yy)
493: {
494: Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data;
495: const PetscScalar *ax;
496: PetscScalar *ay;
497: PetscMemType axmtype, aymtype;
499: PetscFunctionBegin;
500: if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(mat));
501: PetscCall(VecGetArrayReadAndMemType(xx, &ax, &axmtype));
502: PetscCall(VecGetArrayWriteAndMemType(mdn->lvec, &ay, &aymtype));
503: PetscCall(PetscSFBcastWithMemTypeBegin(mdn->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPI_REPLACE));
504: PetscCall(PetscSFBcastEnd(mdn->Mvctx, MPIU_SCALAR, ax, ay, MPI_REPLACE));
505: PetscCall(VecRestoreArrayWriteAndMemType(mdn->lvec, &ay));
506: PetscCall(VecRestoreArrayReadAndMemType(xx, &ax));
507: PetscCall((*mdn->A->ops->mult)(mdn->A, mdn->lvec, yy));
508: PetscFunctionReturn(PETSC_SUCCESS);
509: }
511: static PetscErrorCode MatMultAddColumnRange_MPIDense(Mat mat, Vec xx, Vec yy, Vec zz, PetscInt c_start, PetscInt c_end)
512: {
513: Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data;
514: const PetscScalar *ax;
515: PetscScalar *ay;
516: PetscMemType axmtype, aymtype;
518: PetscFunctionBegin;
519: if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(mat));
520: PetscCall(VecGetArrayReadAndMemType(xx, &ax, &axmtype));
521: PetscCall(VecGetArrayAndMemType(mdn->lvec, &ay, &aymtype));
522: PetscCall(PetscSFBcastWithMemTypeBegin(mdn->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPI_REPLACE));
523: PetscCall(PetscSFBcastEnd(mdn->Mvctx, MPIU_SCALAR, ax, ay, MPI_REPLACE));
524: PetscCall(VecRestoreArrayAndMemType(mdn->lvec, &ay));
525: PetscCall(VecRestoreArrayReadAndMemType(xx, &ax));
526: PetscUseMethod(mdn->A, "MatMultAddColumnRange_C", (Mat, Vec, Vec, Vec, PetscInt, PetscInt), (mdn->A, mdn->lvec, yy, zz, c_start, c_end));
527: PetscFunctionReturn(PETSC_SUCCESS);
528: }
530: static PetscErrorCode MatMultAdd_MPIDense(Mat mat, Vec xx, Vec yy, Vec zz)
531: {
532: Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data;
533: const PetscScalar *ax;
534: PetscScalar *ay;
535: PetscMemType axmtype, aymtype;
537: PetscFunctionBegin;
538: if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(mat));
539: PetscCall(VecGetArrayReadAndMemType(xx, &ax, &axmtype));
540: PetscCall(VecGetArrayAndMemType(mdn->lvec, &ay, &aymtype));
541: PetscCall(PetscSFBcastWithMemTypeBegin(mdn->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPI_REPLACE));
542: PetscCall(PetscSFBcastEnd(mdn->Mvctx, MPIU_SCALAR, ax, ay, MPI_REPLACE));
543: PetscCall(VecRestoreArrayAndMemType(mdn->lvec, &ay));
544: PetscCall(VecRestoreArrayReadAndMemType(xx, &ax));
545: PetscCall((*mdn->A->ops->multadd)(mdn->A, mdn->lvec, yy, zz));
546: PetscFunctionReturn(PETSC_SUCCESS);
547: }
549: static PetscErrorCode MatMultHermitianTransposeColumnRange_MPIDense(Mat A, Vec xx, Vec yy, PetscInt c_start, PetscInt c_end)
550: {
551: Mat_MPIDense *a = (Mat_MPIDense *)A->data;
552: const PetscScalar *ax;
553: PetscScalar *ay;
554: PetscMemType axmtype, aymtype;
555: PetscInt r_start, r_end;
556: PetscInt c_start_local, c_end_local;
558: PetscFunctionBegin;
559: if (!a->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A));
560: PetscCall(VecZeroEntries(a->lvec));
561: PetscCall(VecGetOwnershipRange(yy, &r_start, &r_end));
562: c_start_local = PetscMax(c_start, r_start);
563: c_end_local = PetscMin(c_end, r_end);
564: PetscCall(VecGetArrayAndMemType(yy, &ay, &aymtype));
565: if (c_end_local > c_start_local) {
566: if (PetscMemTypeHost(aymtype)) {
567: PetscCall(PetscArrayzero(&ay[c_start_local], (size_t)(c_end_local - c_start_local)));
568: } else {
569: PetscCall(PetscDeviceRegisterMemory(ay, aymtype, sizeof(*ay) * ((size_t)(r_end - r_start))));
570: PetscCall(PetscDeviceArrayZero(NULL, &ay[c_start_local], (size_t)(c_end_local - c_start_local)));
571: }
572: }
573: PetscUseMethod(a->A, "MatMultHermitianTransposeColumnRange_C", (Mat, Vec, Vec, PetscInt, PetscInt), (a->A, xx, a->lvec, c_start, c_end));
574: PetscCall(VecGetArrayReadAndMemType(a->lvec, &ax, &axmtype));
575: PetscCall(PetscSFReduceWithMemTypeBegin(a->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPIU_SUM));
576: PetscCall(PetscSFReduceEnd(a->Mvctx, MPIU_SCALAR, ax, ay, MPIU_SUM));
577: PetscCall(VecRestoreArrayReadAndMemType(a->lvec, &ax));
578: PetscCall(VecRestoreArrayAndMemType(yy, &ay));
579: PetscFunctionReturn(PETSC_SUCCESS);
580: }
582: static PetscErrorCode MatMultTransposeKernel_MPIDense(Mat A, Vec xx, Vec yy, PetscBool herm)
583: {
584: Mat_MPIDense *a = (Mat_MPIDense *)A->data;
585: const PetscScalar *ax;
586: PetscScalar *ay;
587: PetscMemType axmtype, aymtype;
589: PetscFunctionBegin;
590: if (!a->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A));
591: PetscCall(VecSet(yy, 0.0));
592: if (herm) PetscCall((*a->A->ops->multhermitiantranspose)(a->A, xx, a->lvec));
593: else PetscCall((*a->A->ops->multtranspose)(a->A, xx, a->lvec));
594: PetscCall(VecGetArrayReadAndMemType(a->lvec, &ax, &axmtype));
595: PetscCall(VecGetArrayAndMemType(yy, &ay, &aymtype));
596: PetscCall(PetscSFReduceWithMemTypeBegin(a->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPIU_SUM));
597: PetscCall(PetscSFReduceEnd(a->Mvctx, MPIU_SCALAR, ax, ay, MPIU_SUM));
598: PetscCall(VecRestoreArrayReadAndMemType(a->lvec, &ax));
599: PetscCall(VecRestoreArrayAndMemType(yy, &ay));
600: PetscFunctionReturn(PETSC_SUCCESS);
601: }
603: static PetscErrorCode MatMultHermitianTransposeAddColumnRange_MPIDense(Mat A, Vec xx, Vec yy, Vec zz, PetscInt c_start, PetscInt c_end)
604: {
605: Mat_MPIDense *a = (Mat_MPIDense *)A->data;
606: const PetscScalar *ax;
607: PetscScalar *ay;
608: PetscMemType axmtype, aymtype;
610: PetscFunctionBegin;
611: if (!a->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A));
612: PetscCall(VecCopy(yy, zz));
613: PetscCall(VecZeroEntries(a->lvec));
614: PetscUseMethod(a->A, "MatMultHermitianTransposeColumnRange_C", (Mat, Vec, Vec, PetscInt, PetscInt), (a->A, xx, a->lvec, c_start, c_end));
615: PetscCall(VecGetArrayReadAndMemType(a->lvec, &ax, &axmtype));
616: PetscCall(VecGetArrayAndMemType(zz, &ay, &aymtype));
617: PetscCall(PetscSFReduceWithMemTypeBegin(a->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPIU_SUM));
618: PetscCall(PetscSFReduceEnd(a->Mvctx, MPIU_SCALAR, ax, ay, MPIU_SUM));
619: PetscCall(VecRestoreArrayReadAndMemType(a->lvec, &ax));
620: PetscCall(VecRestoreArrayAndMemType(zz, &ay));
621: PetscFunctionReturn(PETSC_SUCCESS);
622: }
624: static PetscErrorCode MatMultTransposeAddKernel_MPIDense(Mat A, Vec xx, Vec yy, Vec zz, PetscBool herm)
625: {
626: Mat_MPIDense *a = (Mat_MPIDense *)A->data;
627: const PetscScalar *ax;
628: PetscScalar *ay;
629: PetscMemType axmtype, aymtype;
631: PetscFunctionBegin;
632: if (!a->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A));
633: PetscCall(VecCopy(yy, zz));
634: if (herm) PetscCall((*a->A->ops->multhermitiantranspose)(a->A, xx, a->lvec));
635: else PetscCall((*a->A->ops->multtranspose)(a->A, xx, a->lvec));
636: PetscCall(VecGetArrayReadAndMemType(a->lvec, &ax, &axmtype));
637: PetscCall(VecGetArrayAndMemType(zz, &ay, &aymtype));
638: PetscCall(PetscSFReduceWithMemTypeBegin(a->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPIU_SUM));
639: PetscCall(PetscSFReduceEnd(a->Mvctx, MPIU_SCALAR, ax, ay, MPIU_SUM));
640: PetscCall(VecRestoreArrayReadAndMemType(a->lvec, &ax));
641: PetscCall(VecRestoreArrayAndMemType(zz, &ay));
642: PetscFunctionReturn(PETSC_SUCCESS);
643: }
645: static PetscErrorCode MatMultTranspose_MPIDense(Mat A, Vec xx, Vec yy)
646: {
647: PetscFunctionBegin;
648: PetscCall(MatMultTransposeKernel_MPIDense(A, xx, yy, PETSC_FALSE));
649: PetscFunctionReturn(PETSC_SUCCESS);
650: }
652: static PetscErrorCode MatMultTransposeAdd_MPIDense(Mat A, Vec xx, Vec yy, Vec zz)
653: {
654: PetscFunctionBegin;
655: PetscCall(MatMultTransposeAddKernel_MPIDense(A, xx, yy, zz, PETSC_FALSE));
656: PetscFunctionReturn(PETSC_SUCCESS);
657: }
659: static PetscErrorCode MatMultHermitianTranspose_MPIDense(Mat A, Vec xx, Vec yy)
660: {
661: PetscFunctionBegin;
662: PetscCall(MatMultTransposeKernel_MPIDense(A, xx, yy, PETSC_TRUE));
663: PetscFunctionReturn(PETSC_SUCCESS);
664: }
666: static PetscErrorCode MatMultHermitianTransposeAdd_MPIDense(Mat A, Vec xx, Vec yy, Vec zz)
667: {
668: PetscFunctionBegin;
669: PetscCall(MatMultTransposeAddKernel_MPIDense(A, xx, yy, zz, PETSC_TRUE));
670: PetscFunctionReturn(PETSC_SUCCESS);
671: }
673: PetscErrorCode MatGetDiagonal_MPIDense(Mat A, Vec v)
674: {
675: Mat_MPIDense *a = (Mat_MPIDense *)A->data;
676: PetscInt lda, len, i, nl, ng, m = A->rmap->n, radd;
677: PetscScalar *x;
678: const PetscScalar *av;
680: PetscFunctionBegin;
681: PetscCall(VecGetArray(v, &x));
682: PetscCall(VecGetSize(v, &ng));
683: PetscCheck(ng == A->rmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Nonconforming mat and vec");
684: PetscCall(VecGetLocalSize(v, &nl));
685: len = PetscMin(a->A->rmap->n, a->A->cmap->n);
686: radd = A->rmap->rstart * m;
687: PetscCall(MatDenseGetArrayRead(a->A, &av));
688: PetscCall(MatDenseGetLDA(a->A, &lda));
689: for (i = 0; i < len; i++) x[i] = av[radd + i * lda + i];
690: PetscCall(MatDenseRestoreArrayRead(a->A, &av));
691: if (nl - i > 0) PetscCall(PetscArrayzero(x + i, nl - i));
692: PetscCall(VecRestoreArray(v, &x));
693: PetscFunctionReturn(PETSC_SUCCESS);
694: }
696: static PetscErrorCode MatDestroy_MPIDense(Mat mat)
697: {
698: Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data;
700: PetscFunctionBegin;
701: PetscCall(PetscLogObjectState((PetscObject)mat, "Rows=%" PetscInt_FMT ", Cols=%" PetscInt_FMT, mat->rmap->N, mat->cmap->N));
702: PetscCall(MatStashDestroy_Private(&mat->stash));
703: PetscCheck(!mdn->vecinuse, PetscObjectComm((PetscObject)mat), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first");
704: PetscCheck(!mdn->matinuse, PetscObjectComm((PetscObject)mat), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first");
705: PetscCall(MatDestroy(&mdn->A));
706: PetscCall(VecDestroy(&mdn->lvec));
707: PetscCall(PetscSFDestroy(&mdn->Mvctx));
708: PetscCall(VecDestroy(&mdn->cvec));
709: PetscCall(MatDestroy(&mdn->cmat));
711: PetscCall(PetscFree(mat->data));
712: PetscCall(PetscObjectChangeTypeName((PetscObject)mat, NULL));
714: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetLDA_C", NULL));
715: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseSetLDA_C", NULL));
716: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArray_C", NULL));
717: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArray_C", NULL));
718: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArrayRead_C", NULL));
719: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArrayRead_C", NULL));
720: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArrayWrite_C", NULL));
721: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArrayWrite_C", NULL));
722: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDensePlaceArray_C", NULL));
723: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseResetArray_C", NULL));
724: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseReplaceArray_C", NULL));
725: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpiaij_mpidense_C", NULL));
726: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpiaij_C", NULL));
727: #if defined(PETSC_HAVE_ELEMENTAL)
728: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_elemental_C", NULL));
729: #endif
730: #if defined(PETSC_HAVE_SCALAPACK)
731: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_scalapack_C", NULL));
732: #endif
733: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMPIDenseSetPreallocation_C", NULL));
734: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaij_mpidense_C", NULL));
735: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaij_C", NULL));
736: #if defined(PETSC_HAVE_CUDA)
737: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijcusparse_mpidense_C", NULL));
738: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaijcusparse_C", NULL));
739: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpidensecuda_C", NULL));
740: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidensecuda_mpidense_C", NULL));
741: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaij_mpidensecuda_C", NULL));
742: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijcusparse_mpidensecuda_C", NULL));
743: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidensecuda_mpiaij_C", NULL));
744: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidensecuda_mpiaijcusparse_C", NULL));
745: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAGetArray_C", NULL));
746: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAGetArrayRead_C", NULL));
747: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAGetArrayWrite_C", NULL));
748: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDARestoreArray_C", NULL));
749: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDARestoreArrayRead_C", NULL));
750: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDARestoreArrayWrite_C", NULL));
751: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAPlaceArray_C", NULL));
752: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAResetArray_C", NULL));
753: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAReplaceArray_C", NULL));
754: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDASetPreallocation_C", NULL));
755: #endif
756: #if defined(PETSC_HAVE_HIP)
757: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijhipsparse_mpidense_C", NULL));
758: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaijhipsparse_C", NULL));
759: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpidensehip_C", NULL));
760: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidensehip_mpidense_C", NULL));
761: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaij_mpidensehip_C", NULL));
762: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijhipsparse_mpidensehip_C", NULL));
763: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidensehip_mpiaij_C", NULL));
764: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidensehip_mpiaijhipsparse_C", NULL));
765: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPGetArray_C", NULL));
766: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPGetArrayRead_C", NULL));
767: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPGetArrayWrite_C", NULL));
768: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPRestoreArray_C", NULL));
769: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPRestoreArrayRead_C", NULL));
770: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPRestoreArrayWrite_C", NULL));
771: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPPlaceArray_C", NULL));
772: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPResetArray_C", NULL));
773: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPReplaceArray_C", NULL));
774: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPSetPreallocation_C", NULL));
775: #endif
776: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumn_C", NULL));
777: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumn_C", NULL));
778: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVec_C", NULL));
779: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVec_C", NULL));
780: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVecRead_C", NULL));
781: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVecRead_C", NULL));
782: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVecWrite_C", NULL));
783: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVecWrite_C", NULL));
784: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetSubMatrix_C", NULL));
785: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreSubMatrix_C", NULL));
786: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMultColumnRange_C", NULL));
787: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMultAddColumnRange_C", NULL));
788: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMultHermitianTransposeColumnRange_C", NULL));
789: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMultHermitianTransposeAddColumnRange_C", NULL));
791: PetscCall(PetscObjectCompose((PetscObject)mat, "DiagonalBlock", NULL));
792: PetscFunctionReturn(PETSC_SUCCESS);
793: }
795: #include <petscdraw.h>
796: static PetscErrorCode MatView_MPIDense_ASCIIorDraworSocket(Mat mat, PetscViewer viewer)
797: {
798: Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data;
799: PetscMPIInt rank;
800: PetscViewerType vtype;
801: PetscBool isascii, isdraw;
802: PetscViewer sviewer;
803: PetscViewerFormat format;
805: PetscFunctionBegin;
806: PetscCallMPI(MPI_Comm_rank(PetscObjectComm((PetscObject)mat), &rank));
807: PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERASCII, &isascii));
808: PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERDRAW, &isdraw));
809: if (isascii) {
810: PetscCall(PetscViewerGetType(viewer, &vtype));
811: PetscCall(PetscViewerGetFormat(viewer, &format));
812: if (format == PETSC_VIEWER_ASCII_INFO_DETAIL) {
813: MatInfo info;
814: PetscCall(MatGetInfo(mat, MAT_LOCAL, &info));
815: PetscCall(PetscViewerASCIIPushSynchronized(viewer));
816: PetscCall(PetscViewerASCIISynchronizedPrintf(viewer, " [%d] local rows %" PetscInt_FMT " nz %" PetscInt_FMT " nz alloced %" PetscInt_FMT " mem %" PetscInt_FMT " \n", rank, mat->rmap->n, (PetscInt)info.nz_used, (PetscInt)info.nz_allocated,
817: (PetscInt)info.memory));
818: PetscCall(PetscViewerFlush(viewer));
819: PetscCall(PetscViewerASCIIPopSynchronized(viewer));
820: if (mdn->Mvctx) PetscCall(PetscSFView(mdn->Mvctx, viewer));
821: PetscFunctionReturn(PETSC_SUCCESS);
822: } else if (format == PETSC_VIEWER_ASCII_INFO) {
823: PetscFunctionReturn(PETSC_SUCCESS);
824: }
825: } else if (isdraw) {
826: PetscDraw draw;
827: PetscBool isnull;
829: PetscCall(PetscViewerDrawGetDraw(viewer, 0, &draw));
830: PetscCall(PetscDrawIsNull(draw, &isnull));
831: if (isnull) PetscFunctionReturn(PETSC_SUCCESS);
832: }
834: {
835: /* assemble the entire matrix onto first processor. */
836: Mat A;
837: PetscInt M = mat->rmap->N, N = mat->cmap->N, m, row, i, nz;
838: PetscInt *cols;
839: PetscScalar *vals;
841: PetscCall(MatCreate(PetscObjectComm((PetscObject)mat), &A));
842: if (rank == 0) {
843: PetscCall(MatSetSizes(A, M, N, M, N));
844: } else {
845: PetscCall(MatSetSizes(A, 0, 0, M, N));
846: }
847: /* Since this is a temporary matrix, MATMPIDENSE instead of ((PetscObject)A)->type_name here is probably acceptable. */
848: PetscCall(MatSetType(A, MATMPIDENSE));
849: PetscCall(MatMPIDenseSetPreallocation(A, NULL));
851: /* Copy the matrix ... This isn't the most efficient means,
852: but it's quick for now */
853: A->insertmode = INSERT_VALUES;
855: row = mat->rmap->rstart;
856: m = mdn->A->rmap->n;
857: for (i = 0; i < m; i++) {
858: PetscCall(MatGetRow_MPIDense(mat, row, &nz, &cols, &vals));
859: PetscCall(MatSetValues_MPIDense(A, 1, &row, nz, cols, vals, INSERT_VALUES));
860: PetscCall(MatRestoreRow_MPIDense(mat, row, &nz, &cols, &vals));
861: row++;
862: }
864: PetscCall(MatAssemblyBegin(A, MAT_FINAL_ASSEMBLY));
865: PetscCall(MatAssemblyEnd(A, MAT_FINAL_ASSEMBLY));
866: PetscCall(PetscViewerGetSubViewer(viewer, PETSC_COMM_SELF, &sviewer));
867: if (rank == 0) {
868: PetscCall(PetscObjectSetName((PetscObject)((Mat_MPIDense *)A->data)->A, ((PetscObject)mat)->name));
869: PetscCall(MatView_SeqDense(((Mat_MPIDense *)A->data)->A, sviewer));
870: }
871: PetscCall(PetscViewerRestoreSubViewer(viewer, PETSC_COMM_SELF, &sviewer));
872: PetscCall(MatDestroy(&A));
873: }
874: PetscFunctionReturn(PETSC_SUCCESS);
875: }
877: static PetscErrorCode MatView_MPIDense(Mat mat, PetscViewer viewer)
878: {
879: PetscBool isascii, isbinary, isdraw, issocket;
881: PetscFunctionBegin;
882: PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERASCII, &isascii));
883: PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERBINARY, &isbinary));
884: PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERSOCKET, &issocket));
885: PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERDRAW, &isdraw));
887: if (isascii || issocket || isdraw) PetscCall(MatView_MPIDense_ASCIIorDraworSocket(mat, viewer));
888: else if (isbinary) PetscCall(MatView_Dense_Binary(mat, viewer));
889: PetscFunctionReturn(PETSC_SUCCESS);
890: }
892: static PetscErrorCode MatGetInfo_MPIDense(Mat A, MatInfoType flag, MatInfo *info)
893: {
894: Mat_MPIDense *mat = (Mat_MPIDense *)A->data;
895: Mat mdn = mat->A;
896: PetscLogDouble isend[5], irecv[5];
898: PetscFunctionBegin;
899: info->block_size = 1.0;
901: PetscCall(MatGetInfo(mdn, MAT_LOCAL, info));
903: isend[0] = info->nz_used;
904: isend[1] = info->nz_allocated;
905: isend[2] = info->nz_unneeded;
906: isend[3] = info->memory;
907: isend[4] = info->mallocs;
908: if (flag == MAT_LOCAL) {
909: info->nz_used = isend[0];
910: info->nz_allocated = isend[1];
911: info->nz_unneeded = isend[2];
912: info->memory = isend[3];
913: info->mallocs = isend[4];
914: } else if (flag == MAT_GLOBAL_MAX) {
915: PetscCallMPI(MPIU_Allreduce(isend, irecv, 5, MPIU_PETSCLOGDOUBLE, MPI_MAX, PetscObjectComm((PetscObject)A)));
917: info->nz_used = irecv[0];
918: info->nz_allocated = irecv[1];
919: info->nz_unneeded = irecv[2];
920: info->memory = irecv[3];
921: info->mallocs = irecv[4];
922: } else if (flag == MAT_GLOBAL_SUM) {
923: PetscCallMPI(MPIU_Allreduce(isend, irecv, 5, MPIU_PETSCLOGDOUBLE, MPI_SUM, PetscObjectComm((PetscObject)A)));
925: info->nz_used = irecv[0];
926: info->nz_allocated = irecv[1];
927: info->nz_unneeded = irecv[2];
928: info->memory = irecv[3];
929: info->mallocs = irecv[4];
930: }
931: info->fill_ratio_given = 0; /* no parallel LU/ILU/Cholesky */
932: info->fill_ratio_needed = 0;
933: info->factor_mallocs = 0;
934: PetscFunctionReturn(PETSC_SUCCESS);
935: }
937: static PetscErrorCode MatSetOption_MPIDense(Mat A, MatOption op, PetscBool flg)
938: {
939: Mat_MPIDense *a = (Mat_MPIDense *)A->data;
941: PetscFunctionBegin;
942: switch (op) {
943: case MAT_NEW_NONZERO_LOCATIONS:
944: case MAT_NEW_NONZERO_LOCATION_ERR:
945: case MAT_NEW_NONZERO_ALLOCATION_ERR:
946: MatCheckPreallocated(A, 1);
947: PetscCall(MatSetOption(a->A, op, flg));
948: break;
949: case MAT_ROW_ORIENTED:
950: MatCheckPreallocated(A, 1);
951: a->roworiented = flg;
952: PetscCall(MatSetOption(a->A, op, flg));
953: break;
954: case MAT_IGNORE_OFF_PROC_ENTRIES:
955: a->donotstash = flg;
956: break;
957: case MAT_SYMMETRIC:
958: case MAT_STRUCTURALLY_SYMMETRIC:
959: case MAT_HERMITIAN:
960: case MAT_SYMMETRY_ETERNAL:
961: case MAT_STRUCTURAL_SYMMETRY_ETERNAL:
962: case MAT_SPD:
963: case MAT_SPD_ETERNAL:
964: /* if the diagonal matrix is square it inherits some of the properties above */
965: if (a->A && A->rmap->n == A->cmap->n) PetscCall(MatSetOption(a->A, op, flg));
966: break;
967: default:
968: break;
969: }
970: PetscFunctionReturn(PETSC_SUCCESS);
971: }
973: static PetscErrorCode MatDiagonalScale_MPIDense(Mat A, Vec ll, Vec rr)
974: {
975: Mat_MPIDense *mdn = (Mat_MPIDense *)A->data;
976: const PetscScalar *l;
977: PetscScalar x, *v, *vv, *r;
978: PetscInt i, j, s2a, s3a, s2, s3, m = mdn->A->rmap->n, n = mdn->A->cmap->n, lda;
980: PetscFunctionBegin;
981: PetscCall(MatDenseGetArray(mdn->A, &vv));
982: PetscCall(MatDenseGetLDA(mdn->A, &lda));
983: PetscCall(MatGetLocalSize(A, &s2, &s3));
984: if (ll) {
985: PetscCall(VecGetLocalSize(ll, &s2a));
986: PetscCheck(s2a == s2, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Left scaling vector non-conforming local size, %" PetscInt_FMT " != %" PetscInt_FMT, s2a, s2);
987: PetscCall(VecGetArrayRead(ll, &l));
988: for (i = 0; i < m; i++) {
989: x = l[i];
990: v = vv + i;
991: for (j = 0; j < n; j++) {
992: (*v) *= x;
993: v += lda;
994: }
995: }
996: PetscCall(VecRestoreArrayRead(ll, &l));
997: PetscCall(PetscLogFlops(1.0 * n * m));
998: }
999: if (rr) {
1000: const PetscScalar *ar;
1002: PetscCall(VecGetLocalSize(rr, &s3a));
1003: PetscCheck(s3a == s3, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Right scaling vec non-conforming local size, %" PetscInt_FMT " != %" PetscInt_FMT ".", s3a, s3);
1004: PetscCall(VecGetArrayRead(rr, &ar));
1005: if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A));
1006: PetscCall(VecGetArray(mdn->lvec, &r));
1007: PetscCall(PetscSFBcastBegin(mdn->Mvctx, MPIU_SCALAR, ar, r, MPI_REPLACE));
1008: PetscCall(PetscSFBcastEnd(mdn->Mvctx, MPIU_SCALAR, ar, r, MPI_REPLACE));
1009: PetscCall(VecRestoreArrayRead(rr, &ar));
1010: for (i = 0; i < n; i++) {
1011: x = r[i];
1012: v = vv + i * lda;
1013: for (j = 0; j < m; j++) (*v++) *= x;
1014: }
1015: PetscCall(VecRestoreArray(mdn->lvec, &r));
1016: PetscCall(PetscLogFlops(1.0 * n * m));
1017: }
1018: PetscCall(MatDenseRestoreArray(mdn->A, &vv));
1019: PetscFunctionReturn(PETSC_SUCCESS);
1020: }
1022: static PetscErrorCode MatNorm_MPIDense(Mat A, NormType type, PetscReal *nrm)
1023: {
1024: Mat_MPIDense *mdn = (Mat_MPIDense *)A->data;
1025: PetscInt i, j;
1026: PetscMPIInt size;
1027: PetscReal sum = 0.0;
1028: const PetscScalar *av, *v;
1030: PetscFunctionBegin;
1031: PetscCall(MatDenseGetArrayRead(mdn->A, &av));
1032: v = av;
1033: PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)A), &size));
1034: if (size == 1) {
1035: PetscCall(MatNorm(mdn->A, type, nrm));
1036: } else {
1037: if (type == NORM_FROBENIUS) {
1038: for (i = 0; i < mdn->A->cmap->n * mdn->A->rmap->n; i++) {
1039: sum += PetscRealPart(PetscConj(*v) * (*v));
1040: v++;
1041: }
1042: PetscCallMPI(MPIU_Allreduce(&sum, nrm, 1, MPIU_REAL, MPIU_SUM, PetscObjectComm((PetscObject)A)));
1043: *nrm = PetscSqrtReal(*nrm);
1044: PetscCall(PetscLogFlops(2.0 * mdn->A->cmap->n * mdn->A->rmap->n));
1045: } else if (type == NORM_1) {
1046: PetscReal *tmp;
1048: PetscCall(PetscCalloc1(A->cmap->N, &tmp));
1049: *nrm = 0.0;
1050: v = av;
1051: for (j = 0; j < mdn->A->cmap->n; j++) {
1052: for (i = 0; i < mdn->A->rmap->n; i++) {
1053: tmp[j] += PetscAbsScalar(*v);
1054: v++;
1055: }
1056: }
1057: PetscCallMPI(MPIU_Allreduce(MPI_IN_PLACE, tmp, A->cmap->N, MPIU_REAL, MPIU_SUM, PetscObjectComm((PetscObject)A)));
1058: for (j = 0; j < A->cmap->N; j++) {
1059: if (tmp[j] > *nrm) *nrm = tmp[j];
1060: }
1061: PetscCall(PetscFree(tmp));
1062: PetscCall(PetscLogFlops(A->cmap->n * A->rmap->n));
1063: } else if (type == NORM_INFINITY) { /* max row norm */
1064: PetscCall(MatNorm(mdn->A, type, nrm));
1065: PetscCallMPI(MPIU_Allreduce(MPI_IN_PLACE, nrm, 1, MPIU_REAL, MPIU_MAX, PetscObjectComm((PetscObject)A)));
1066: } else SETERRQ(PetscObjectComm((PetscObject)A), PETSC_ERR_SUP, "No support for two norm");
1067: }
1068: PetscCall(MatDenseRestoreArrayRead(mdn->A, &av));
1069: PetscFunctionReturn(PETSC_SUCCESS);
1070: }
1072: static PetscErrorCode MatTranspose_MPIDense(Mat A, MatReuse reuse, Mat *matout)
1073: {
1074: Mat_MPIDense *a = (Mat_MPIDense *)A->data;
1075: Mat B;
1076: PetscInt M = A->rmap->N, N = A->cmap->N, m, n, *rwork, rstart = A->rmap->rstart;
1077: PetscInt j, i, lda;
1078: PetscScalar *v;
1080: PetscFunctionBegin;
1081: if (reuse == MAT_REUSE_MATRIX) PetscCall(MatTransposeCheckNonzeroState_Private(A, *matout));
1082: if (reuse == MAT_INITIAL_MATRIX || reuse == MAT_INPLACE_MATRIX) {
1083: PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &B));
1084: PetscCall(MatSetSizes(B, A->cmap->n, A->rmap->n, N, M));
1085: PetscCall(MatSetType(B, ((PetscObject)A)->type_name));
1086: PetscCall(MatMPIDenseSetPreallocation(B, NULL));
1087: } else B = *matout;
1089: m = a->A->rmap->n;
1090: n = a->A->cmap->n;
1091: PetscCall(MatDenseGetArrayRead(a->A, (const PetscScalar **)&v));
1092: PetscCall(MatDenseGetLDA(a->A, &lda));
1093: PetscCall(PetscMalloc1(m, &rwork));
1094: for (i = 0; i < m; i++) rwork[i] = rstart + i;
1095: for (j = 0; j < n; j++) {
1096: PetscCall(MatSetValues(B, 1, &j, m, rwork, v, INSERT_VALUES));
1097: v = PetscSafePointerPlusOffset(v, lda);
1098: }
1099: PetscCall(MatDenseRestoreArrayRead(a->A, (const PetscScalar **)&v));
1100: PetscCall(PetscFree(rwork));
1101: PetscCall(MatAssemblyBegin(B, MAT_FINAL_ASSEMBLY));
1102: PetscCall(MatAssemblyEnd(B, MAT_FINAL_ASSEMBLY));
1103: if (reuse == MAT_INITIAL_MATRIX || reuse == MAT_REUSE_MATRIX) {
1104: *matout = B;
1105: } else {
1106: PetscCall(MatHeaderMerge(A, &B));
1107: }
1108: PetscFunctionReturn(PETSC_SUCCESS);
1109: }
1111: static PetscErrorCode MatDuplicate_MPIDense(Mat, MatDuplicateOption, Mat *);
1112: PETSC_INTERN PetscErrorCode MatScale_MPIDense(Mat, PetscScalar);
1114: static PetscErrorCode MatSetUp_MPIDense(Mat A)
1115: {
1116: PetscFunctionBegin;
1117: PetscCall(PetscLayoutSetUp(A->rmap));
1118: PetscCall(PetscLayoutSetUp(A->cmap));
1119: if (!A->preallocated) PetscCall(MatMPIDenseSetPreallocation(A, NULL));
1120: PetscFunctionReturn(PETSC_SUCCESS);
1121: }
1123: static PetscErrorCode MatAXPY_MPIDense(Mat Y, PetscScalar alpha, Mat X, MatStructure str)
1124: {
1125: Mat_MPIDense *A = (Mat_MPIDense *)Y->data, *B = (Mat_MPIDense *)X->data;
1127: PetscFunctionBegin;
1128: PetscCall(MatAXPY(A->A, alpha, B->A, str));
1129: PetscFunctionReturn(PETSC_SUCCESS);
1130: }
1132: static PetscErrorCode MatConjugate_MPIDense(Mat mat)
1133: {
1134: Mat_MPIDense *a = (Mat_MPIDense *)mat->data;
1136: PetscFunctionBegin;
1137: PetscCall(MatConjugate(a->A));
1138: PetscFunctionReturn(PETSC_SUCCESS);
1139: }
1141: static PetscErrorCode MatRealPart_MPIDense(Mat A)
1142: {
1143: Mat_MPIDense *a = (Mat_MPIDense *)A->data;
1145: PetscFunctionBegin;
1146: PetscCall(MatRealPart(a->A));
1147: PetscFunctionReturn(PETSC_SUCCESS);
1148: }
1150: static PetscErrorCode MatImaginaryPart_MPIDense(Mat A)
1151: {
1152: Mat_MPIDense *a = (Mat_MPIDense *)A->data;
1154: PetscFunctionBegin;
1155: PetscCall(MatImaginaryPart(a->A));
1156: PetscFunctionReturn(PETSC_SUCCESS);
1157: }
1159: static PetscErrorCode MatGetColumnVector_MPIDense(Mat A, Vec v, PetscInt col)
1160: {
1161: Mat_MPIDense *a = (Mat_MPIDense *)A->data;
1163: PetscFunctionBegin;
1164: PetscCheck(a->A, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Missing local matrix");
1165: PetscCheck(a->A->ops->getcolumnvector, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Missing get column operation");
1166: PetscCall((*a->A->ops->getcolumnvector)(a->A, v, col));
1167: PetscFunctionReturn(PETSC_SUCCESS);
1168: }
1170: PETSC_INTERN PetscErrorCode MatGetColumnReductions_SeqDense(Mat, PetscInt, PetscReal *);
1172: static PetscErrorCode MatGetColumnReductions_MPIDense(Mat A, PetscInt type, PetscReal *reductions)
1173: {
1174: PetscInt i, m, n;
1175: Mat_MPIDense *a = (Mat_MPIDense *)A->data;
1177: PetscFunctionBegin;
1178: PetscCall(MatGetSize(A, &m, &n));
1179: if (type == REDUCTION_MEAN_REALPART) {
1180: PetscCall(MatGetColumnReductions_SeqDense(a->A, (PetscInt)REDUCTION_SUM_REALPART, reductions));
1181: } else if (type == REDUCTION_MEAN_IMAGINARYPART) {
1182: PetscCall(MatGetColumnReductions_SeqDense(a->A, (PetscInt)REDUCTION_SUM_IMAGINARYPART, reductions));
1183: } else {
1184: PetscCall(MatGetColumnReductions_SeqDense(a->A, type, reductions));
1185: }
1186: if (type == NORM_2) {
1187: for (i = 0; i < n; i++) reductions[i] *= reductions[i];
1188: }
1189: if (type == NORM_INFINITY) {
1190: PetscCallMPI(MPIU_Allreduce(MPI_IN_PLACE, reductions, n, MPIU_REAL, MPIU_MAX, A->hdr.comm));
1191: } else {
1192: PetscCallMPI(MPIU_Allreduce(MPI_IN_PLACE, reductions, n, MPIU_REAL, MPIU_SUM, A->hdr.comm));
1193: }
1194: if (type == NORM_2) {
1195: for (i = 0; i < n; i++) reductions[i] = PetscSqrtReal(reductions[i]);
1196: } else if (type == REDUCTION_MEAN_REALPART || type == REDUCTION_MEAN_IMAGINARYPART) {
1197: for (i = 0; i < n; i++) reductions[i] /= m;
1198: }
1199: PetscFunctionReturn(PETSC_SUCCESS);
1200: }
1202: static PetscErrorCode MatSetRandom_MPIDense(Mat x, PetscRandom rctx)
1203: {
1204: Mat_MPIDense *d = (Mat_MPIDense *)x->data;
1206: PetscFunctionBegin;
1207: PetscCall(MatSetRandom(d->A, rctx));
1208: #if defined(PETSC_HAVE_DEVICE)
1209: x->offloadmask = d->A->offloadmask;
1210: #endif
1211: PetscFunctionReturn(PETSC_SUCCESS);
1212: }
1214: static PetscErrorCode MatMissingDiagonal_MPIDense(Mat A, PetscBool *missing, PetscInt *d)
1215: {
1216: PetscFunctionBegin;
1217: *missing = PETSC_FALSE;
1218: PetscFunctionReturn(PETSC_SUCCESS);
1219: }
1221: static PetscErrorCode MatMatTransposeMultSymbolic_MPIDense_MPIDense(Mat, Mat, PetscReal, Mat);
1222: static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense(Mat, Mat, Mat);
1223: static PetscErrorCode MatTransposeMatMultSymbolic_MPIDense_MPIDense(Mat, Mat, PetscReal, Mat);
1224: static PetscErrorCode MatTransposeMatMultNumeric_MPIDense_MPIDense(Mat, Mat, Mat);
1225: static PetscErrorCode MatEqual_MPIDense(Mat, Mat, PetscBool *);
1226: static PetscErrorCode MatLoad_MPIDense(Mat, PetscViewer);
1227: static PetscErrorCode MatProductSetFromOptions_MPIDense(Mat);
1229: static struct _MatOps MatOps_Values = {MatSetValues_MPIDense,
1230: MatGetRow_MPIDense,
1231: MatRestoreRow_MPIDense,
1232: MatMult_MPIDense,
1233: /* 4*/ MatMultAdd_MPIDense,
1234: MatMultTranspose_MPIDense,
1235: MatMultTransposeAdd_MPIDense,
1236: NULL,
1237: NULL,
1238: NULL,
1239: /* 10*/ NULL,
1240: NULL,
1241: NULL,
1242: NULL,
1243: MatTranspose_MPIDense,
1244: /* 15*/ MatGetInfo_MPIDense,
1245: MatEqual_MPIDense,
1246: MatGetDiagonal_MPIDense,
1247: MatDiagonalScale_MPIDense,
1248: MatNorm_MPIDense,
1249: /* 20*/ MatAssemblyBegin_MPIDense,
1250: MatAssemblyEnd_MPIDense,
1251: MatSetOption_MPIDense,
1252: MatZeroEntries_MPIDense,
1253: /* 24*/ MatZeroRows_MPIDense,
1254: NULL,
1255: NULL,
1256: NULL,
1257: NULL,
1258: /* 29*/ MatSetUp_MPIDense,
1259: NULL,
1260: NULL,
1261: MatGetDiagonalBlock_MPIDense,
1262: NULL,
1263: /* 34*/ MatDuplicate_MPIDense,
1264: NULL,
1265: NULL,
1266: NULL,
1267: NULL,
1268: /* 39*/ MatAXPY_MPIDense,
1269: MatCreateSubMatrices_MPIDense,
1270: NULL,
1271: MatGetValues_MPIDense,
1272: MatCopy_MPIDense,
1273: /* 44*/ NULL,
1274: MatScale_MPIDense,
1275: MatShift_MPIDense,
1276: NULL,
1277: NULL,
1278: /* 49*/ MatSetRandom_MPIDense,
1279: NULL,
1280: NULL,
1281: NULL,
1282: NULL,
1283: /* 54*/ NULL,
1284: NULL,
1285: NULL,
1286: NULL,
1287: NULL,
1288: /* 59*/ MatCreateSubMatrix_MPIDense,
1289: MatDestroy_MPIDense,
1290: MatView_MPIDense,
1291: NULL,
1292: NULL,
1293: /* 64*/ NULL,
1294: NULL,
1295: NULL,
1296: NULL,
1297: NULL,
1298: /* 69*/ NULL,
1299: NULL,
1300: NULL,
1301: NULL,
1302: NULL,
1303: /* 74*/ NULL,
1304: NULL,
1305: NULL,
1306: NULL,
1307: MatLoad_MPIDense,
1308: /* 79*/ NULL,
1309: NULL,
1310: NULL,
1311: NULL,
1312: /* 83*/ NULL,
1313: NULL,
1314: NULL,
1315: NULL,
1316: MatMatTransposeMultSymbolic_MPIDense_MPIDense,
1317: MatMatTransposeMultNumeric_MPIDense_MPIDense,
1318: /* 89*/ NULL,
1319: MatProductSetFromOptions_MPIDense,
1320: NULL,
1321: NULL,
1322: MatConjugate_MPIDense,
1323: /* 94*/ NULL,
1324: NULL,
1325: MatRealPart_MPIDense,
1326: MatImaginaryPart_MPIDense,
1327: NULL,
1328: /*99*/ NULL,
1329: NULL,
1330: NULL,
1331: NULL,
1332: MatGetColumnVector_MPIDense,
1333: /*104*/ MatMissingDiagonal_MPIDense,
1334: NULL,
1335: NULL,
1336: NULL,
1337: NULL,
1338: /*109*/ NULL,
1339: NULL,
1340: NULL,
1341: MatMultHermitianTranspose_MPIDense,
1342: MatMultHermitianTransposeAdd_MPIDense,
1343: /*114*/ NULL,
1344: NULL,
1345: MatGetColumnReductions_MPIDense,
1346: NULL,
1347: NULL,
1348: NULL,
1349: /*120*/ NULL,
1350: MatTransposeMatMultSymbolic_MPIDense_MPIDense,
1351: MatTransposeMatMultNumeric_MPIDense_MPIDense,
1352: NULL,
1353: /*124*/ NULL,
1354: NULL,
1355: NULL,
1356: NULL,
1357: NULL,
1358: /*129*/ NULL,
1359: NULL,
1360: MatCreateMPIMatConcatenateSeqMat_MPIDense,
1361: NULL,
1362: NULL,
1363: /*134*/ NULL,
1364: NULL,
1365: NULL,
1366: NULL,
1367: NULL,
1368: /*139*/ NULL,
1369: NULL,
1370: NULL,
1371: NULL,
1372: NULL};
1374: static PetscErrorCode MatMPIDenseSetPreallocation_MPIDense(Mat mat, PetscScalar *data)
1375: {
1376: Mat_MPIDense *a = (Mat_MPIDense *)mat->data;
1377: MatType mtype = MATSEQDENSE;
1379: PetscFunctionBegin;
1380: PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)mat), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first");
1381: PetscCall(PetscLayoutSetUp(mat->rmap));
1382: PetscCall(PetscLayoutSetUp(mat->cmap));
1383: if (!a->A) {
1384: PetscCall(MatCreate(PETSC_COMM_SELF, &a->A));
1385: PetscCall(MatSetSizes(a->A, mat->rmap->n, mat->cmap->N, mat->rmap->n, mat->cmap->N));
1386: }
1387: #if defined(PETSC_HAVE_CUDA)
1388: PetscBool iscuda;
1389: PetscCall(PetscObjectTypeCompare((PetscObject)mat, MATMPIDENSECUDA, &iscuda));
1390: if (iscuda) mtype = MATSEQDENSECUDA;
1391: #endif
1392: #if defined(PETSC_HAVE_HIP)
1393: PetscBool iship;
1394: PetscCall(PetscObjectTypeCompare((PetscObject)mat, MATMPIDENSEHIP, &iship));
1395: if (iship) mtype = MATSEQDENSEHIP;
1396: #endif
1397: PetscCall(MatSetType(a->A, mtype));
1398: PetscCall(MatSeqDenseSetPreallocation(a->A, data));
1399: #if defined(PETSC_HAVE_CUDA) || defined(PETSC_HAVE_HIP)
1400: mat->offloadmask = a->A->offloadmask;
1401: #endif
1402: mat->preallocated = PETSC_TRUE;
1403: mat->assembled = PETSC_TRUE;
1404: PetscFunctionReturn(PETSC_SUCCESS);
1405: }
1407: PETSC_INTERN PetscErrorCode MatConvert_MPIAIJ_MPIDense(Mat A, MatType newtype, MatReuse reuse, Mat *newmat)
1408: {
1409: Mat B, C;
1411: PetscFunctionBegin;
1412: PetscCall(MatMPIAIJGetLocalMat(A, MAT_INITIAL_MATRIX, &C));
1413: PetscCall(MatConvert_SeqAIJ_SeqDense(C, MATSEQDENSE, MAT_INITIAL_MATRIX, &B));
1414: PetscCall(MatDestroy(&C));
1415: if (reuse == MAT_REUSE_MATRIX) {
1416: C = *newmat;
1417: } else C = NULL;
1418: PetscCall(MatCreateMPIMatConcatenateSeqMat(PetscObjectComm((PetscObject)A), B, A->cmap->n, !C ? MAT_INITIAL_MATRIX : MAT_REUSE_MATRIX, &C));
1419: PetscCall(MatDestroy(&B));
1420: if (reuse == MAT_INPLACE_MATRIX) PetscCall(MatHeaderReplace(A, &C));
1421: else if (reuse == MAT_INITIAL_MATRIX) *newmat = C;
1422: PetscFunctionReturn(PETSC_SUCCESS);
1423: }
1425: static PetscErrorCode MatConvert_MPIDense_MPIAIJ(Mat A, MatType newtype, MatReuse reuse, Mat *newmat)
1426: {
1427: Mat B, C;
1429: PetscFunctionBegin;
1430: PetscCall(MatDenseGetLocalMatrix(A, &C));
1431: PetscCall(MatConvert_SeqDense_SeqAIJ(C, MATSEQAIJ, MAT_INITIAL_MATRIX, &B));
1432: if (reuse == MAT_REUSE_MATRIX) {
1433: C = *newmat;
1434: } else C = NULL;
1435: PetscCall(MatCreateMPIMatConcatenateSeqMat(PetscObjectComm((PetscObject)A), B, A->cmap->n, !C ? MAT_INITIAL_MATRIX : MAT_REUSE_MATRIX, &C));
1436: PetscCall(MatDestroy(&B));
1437: if (reuse == MAT_INPLACE_MATRIX) PetscCall(MatHeaderReplace(A, &C));
1438: else if (reuse == MAT_INITIAL_MATRIX) *newmat = C;
1439: PetscFunctionReturn(PETSC_SUCCESS);
1440: }
1442: #if defined(PETSC_HAVE_ELEMENTAL)
1443: PETSC_INTERN PetscErrorCode MatConvert_MPIDense_Elemental(Mat A, MatType newtype, MatReuse reuse, Mat *newmat)
1444: {
1445: Mat_MPIDense *a = (Mat_MPIDense *)A->data;
1446: Mat mat_elemental;
1447: PetscScalar *v;
1448: PetscInt m = A->rmap->n, N = A->cmap->N, rstart = A->rmap->rstart, i, *rows, *cols, lda;
1450: PetscFunctionBegin;
1451: if (reuse == MAT_REUSE_MATRIX) {
1452: mat_elemental = *newmat;
1453: PetscCall(MatZeroEntries(*newmat));
1454: } else {
1455: PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &mat_elemental));
1456: PetscCall(MatSetSizes(mat_elemental, PETSC_DECIDE, PETSC_DECIDE, A->rmap->N, A->cmap->N));
1457: PetscCall(MatSetType(mat_elemental, MATELEMENTAL));
1458: PetscCall(MatSetUp(mat_elemental));
1459: PetscCall(MatSetOption(mat_elemental, MAT_ROW_ORIENTED, PETSC_FALSE));
1460: }
1462: PetscCall(PetscMalloc2(m, &rows, N, &cols));
1463: for (i = 0; i < N; i++) cols[i] = i;
1464: for (i = 0; i < m; i++) rows[i] = rstart + i;
1466: /* PETSc-Elemental interface uses axpy for setting off-processor entries, only ADD_VALUES is allowed */
1467: PetscCall(MatDenseGetArray(A, &v));
1468: PetscCall(MatDenseGetLDA(a->A, &lda));
1469: if (lda == m) PetscCall(MatSetValues(mat_elemental, m, rows, N, cols, v, ADD_VALUES));
1470: else {
1471: for (i = 0; i < N; i++) PetscCall(MatSetValues(mat_elemental, m, rows, 1, &i, v + lda * i, ADD_VALUES));
1472: }
1473: PetscCall(MatAssemblyBegin(mat_elemental, MAT_FINAL_ASSEMBLY));
1474: PetscCall(MatAssemblyEnd(mat_elemental, MAT_FINAL_ASSEMBLY));
1475: PetscCall(MatDenseRestoreArray(A, &v));
1476: PetscCall(PetscFree2(rows, cols));
1478: if (reuse == MAT_INPLACE_MATRIX) {
1479: PetscCall(MatHeaderReplace(A, &mat_elemental));
1480: } else {
1481: *newmat = mat_elemental;
1482: }
1483: PetscFunctionReturn(PETSC_SUCCESS);
1484: }
1485: #endif
1487: static PetscErrorCode MatDenseGetColumn_MPIDense(Mat A, PetscInt col, PetscScalar **vals)
1488: {
1489: Mat_MPIDense *mat = (Mat_MPIDense *)A->data;
1491: PetscFunctionBegin;
1492: PetscCall(MatDenseGetColumn(mat->A, col, vals));
1493: PetscFunctionReturn(PETSC_SUCCESS);
1494: }
1496: static PetscErrorCode MatDenseRestoreColumn_MPIDense(Mat A, PetscScalar **vals)
1497: {
1498: Mat_MPIDense *mat = (Mat_MPIDense *)A->data;
1500: PetscFunctionBegin;
1501: PetscCall(MatDenseRestoreColumn(mat->A, vals));
1502: PetscFunctionReturn(PETSC_SUCCESS);
1503: }
1505: PetscErrorCode MatCreateMPIMatConcatenateSeqMat_MPIDense(MPI_Comm comm, Mat inmat, PetscInt n, MatReuse scall, Mat *outmat)
1506: {
1507: Mat_MPIDense *mat;
1508: PetscInt m, nloc, N;
1510: PetscFunctionBegin;
1511: PetscCall(MatGetSize(inmat, &m, &N));
1512: PetscCall(MatGetLocalSize(inmat, NULL, &nloc));
1513: if (scall == MAT_INITIAL_MATRIX) { /* symbolic phase */
1514: PetscInt sum;
1516: if (n == PETSC_DECIDE) PetscCall(PetscSplitOwnership(comm, &n, &N));
1517: /* Check sum(n) = N */
1518: PetscCallMPI(MPIU_Allreduce(&n, &sum, 1, MPIU_INT, MPI_SUM, comm));
1519: PetscCheck(sum == N, PETSC_COMM_SELF, PETSC_ERR_ARG_INCOMP, "Sum of local columns %" PetscInt_FMT " != global columns %" PetscInt_FMT, sum, N);
1521: PetscCall(MatCreateDense(comm, m, n, PETSC_DETERMINE, N, NULL, outmat));
1522: PetscCall(MatSetOption(*outmat, MAT_NO_OFF_PROC_ENTRIES, PETSC_TRUE));
1523: }
1525: /* numeric phase */
1526: mat = (Mat_MPIDense *)(*outmat)->data;
1527: PetscCall(MatCopy(inmat, mat->A, SAME_NONZERO_PATTERN));
1528: PetscFunctionReturn(PETSC_SUCCESS);
1529: }
1531: PetscErrorCode MatDenseGetColumnVec_MPIDense(Mat A, PetscInt col, Vec *v)
1532: {
1533: Mat_MPIDense *a = (Mat_MPIDense *)A->data;
1534: PetscInt lda;
1536: PetscFunctionBegin;
1537: PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first");
1538: PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first");
1539: if (!a->cvec) PetscCall(MatDenseCreateColumnVec_Private(A, &a->cvec));
1540: a->vecinuse = col + 1;
1541: PetscCall(MatDenseGetLDA(a->A, &lda));
1542: PetscCall(MatDenseGetArray(a->A, (PetscScalar **)&a->ptrinuse));
1543: PetscCall(VecPlaceArray(a->cvec, PetscSafePointerPlusOffset(a->ptrinuse, (size_t)col * (size_t)lda)));
1544: *v = a->cvec;
1545: PetscFunctionReturn(PETSC_SUCCESS);
1546: }
1548: PetscErrorCode MatDenseRestoreColumnVec_MPIDense(Mat A, PetscInt col, Vec *v)
1549: {
1550: Mat_MPIDense *a = (Mat_MPIDense *)A->data;
1552: PetscFunctionBegin;
1553: PetscCheck(a->vecinuse, PETSC_COMM_SELF, PETSC_ERR_ORDER, "Need to call MatDenseGetColumnVec() first");
1554: PetscCheck(a->cvec, PETSC_COMM_SELF, PETSC_ERR_PLIB, "Missing internal column vector");
1555: VecCheckAssembled(a->cvec);
1556: a->vecinuse = 0;
1557: PetscCall(MatDenseRestoreArray(a->A, (PetscScalar **)&a->ptrinuse));
1558: PetscCall(VecResetArray(a->cvec));
1559: if (v) *v = NULL;
1560: PetscFunctionReturn(PETSC_SUCCESS);
1561: }
1563: PetscErrorCode MatDenseGetColumnVecRead_MPIDense(Mat A, PetscInt col, Vec *v)
1564: {
1565: Mat_MPIDense *a = (Mat_MPIDense *)A->data;
1566: PetscInt lda;
1568: PetscFunctionBegin;
1569: PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first");
1570: PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first");
1571: if (!a->cvec) PetscCall(MatDenseCreateColumnVec_Private(A, &a->cvec));
1572: a->vecinuse = col + 1;
1573: PetscCall(MatDenseGetLDA(a->A, &lda));
1574: PetscCall(MatDenseGetArrayRead(a->A, &a->ptrinuse));
1575: PetscCall(VecPlaceArray(a->cvec, PetscSafePointerPlusOffset(a->ptrinuse, (size_t)col * (size_t)lda)));
1576: PetscCall(VecLockReadPush(a->cvec));
1577: *v = a->cvec;
1578: PetscFunctionReturn(PETSC_SUCCESS);
1579: }
1581: PetscErrorCode MatDenseRestoreColumnVecRead_MPIDense(Mat A, PetscInt col, Vec *v)
1582: {
1583: Mat_MPIDense *a = (Mat_MPIDense *)A->data;
1585: PetscFunctionBegin;
1586: PetscCheck(a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseGetColumnVec() first");
1587: PetscCheck(a->cvec, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing internal column vector");
1588: VecCheckAssembled(a->cvec);
1589: a->vecinuse = 0;
1590: PetscCall(MatDenseRestoreArrayRead(a->A, &a->ptrinuse));
1591: PetscCall(VecLockReadPop(a->cvec));
1592: PetscCall(VecResetArray(a->cvec));
1593: if (v) *v = NULL;
1594: PetscFunctionReturn(PETSC_SUCCESS);
1595: }
1597: PetscErrorCode MatDenseGetColumnVecWrite_MPIDense(Mat A, PetscInt col, Vec *v)
1598: {
1599: Mat_MPIDense *a = (Mat_MPIDense *)A->data;
1600: PetscInt lda;
1602: PetscFunctionBegin;
1603: PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first");
1604: PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first");
1605: if (!a->cvec) PetscCall(MatDenseCreateColumnVec_Private(A, &a->cvec));
1606: a->vecinuse = col + 1;
1607: PetscCall(MatDenseGetLDA(a->A, &lda));
1608: PetscCall(MatDenseGetArrayWrite(a->A, (PetscScalar **)&a->ptrinuse));
1609: PetscCall(VecPlaceArray(a->cvec, PetscSafePointerPlusOffset(a->ptrinuse, (size_t)col * (size_t)lda)));
1610: *v = a->cvec;
1611: PetscFunctionReturn(PETSC_SUCCESS);
1612: }
1614: PetscErrorCode MatDenseRestoreColumnVecWrite_MPIDense(Mat A, PetscInt col, Vec *v)
1615: {
1616: Mat_MPIDense *a = (Mat_MPIDense *)A->data;
1618: PetscFunctionBegin;
1619: PetscCheck(a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseGetColumnVec() first");
1620: PetscCheck(a->cvec, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing internal column vector");
1621: VecCheckAssembled(a->cvec);
1622: a->vecinuse = 0;
1623: PetscCall(MatDenseRestoreArrayWrite(a->A, (PetscScalar **)&a->ptrinuse));
1624: PetscCall(VecResetArray(a->cvec));
1625: if (v) *v = NULL;
1626: PetscFunctionReturn(PETSC_SUCCESS);
1627: }
1629: static PetscErrorCode MatDenseGetSubMatrix_MPIDense(Mat A, PetscInt rbegin, PetscInt rend, PetscInt cbegin, PetscInt cend, Mat *v)
1630: {
1631: Mat_MPIDense *a = (Mat_MPIDense *)A->data;
1632: Mat_MPIDense *c;
1633: MPI_Comm comm;
1634: PetscInt prbegin, prend, pcbegin, pcend;
1636: PetscFunctionBegin;
1637: PetscCall(PetscObjectGetComm((PetscObject)A, &comm));
1638: PetscCheck(!a->vecinuse, comm, PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first");
1639: PetscCheck(!a->matinuse, comm, PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first");
1640: prbegin = PetscMax(0, PetscMin(A->rmap->rend, rbegin) - A->rmap->rstart);
1641: prend = PetscMin(A->rmap->n, PetscMax(0, rend - A->rmap->rstart));
1642: pcbegin = PetscMax(0, PetscMin(A->cmap->rend, cbegin) - A->cmap->rstart);
1643: pcend = PetscMin(A->cmap->n, PetscMax(0, cend - A->cmap->rstart));
1644: if (!a->cmat) {
1645: PetscCall(MatCreate(comm, &a->cmat));
1646: PetscCall(MatSetType(a->cmat, ((PetscObject)A)->type_name));
1647: if (rend - rbegin == A->rmap->N) PetscCall(PetscLayoutReference(A->rmap, &a->cmat->rmap));
1648: else {
1649: PetscCall(PetscLayoutSetLocalSize(a->cmat->rmap, prend - prbegin));
1650: PetscCall(PetscLayoutSetSize(a->cmat->rmap, rend - rbegin));
1651: PetscCall(PetscLayoutSetUp(a->cmat->rmap));
1652: }
1653: if (cend - cbegin == A->cmap->N) PetscCall(PetscLayoutReference(A->cmap, &a->cmat->cmap));
1654: else {
1655: PetscCall(PetscLayoutSetLocalSize(a->cmat->cmap, pcend - pcbegin));
1656: PetscCall(PetscLayoutSetSize(a->cmat->cmap, cend - cbegin));
1657: PetscCall(PetscLayoutSetUp(a->cmat->cmap));
1658: }
1659: c = (Mat_MPIDense *)a->cmat->data;
1660: c->sub_rbegin = rbegin;
1661: c->sub_rend = rend;
1662: c->sub_cbegin = cbegin;
1663: c->sub_cend = cend;
1664: }
1665: c = (Mat_MPIDense *)a->cmat->data;
1666: if (c->sub_rbegin != rbegin || c->sub_rend != rend) {
1667: PetscCall(PetscLayoutDestroy(&a->cmat->rmap));
1668: PetscCall(PetscLayoutCreate(comm, &a->cmat->rmap));
1669: PetscCall(PetscLayoutSetLocalSize(a->cmat->rmap, prend - prbegin));
1670: PetscCall(PetscLayoutSetSize(a->cmat->rmap, rend - rbegin));
1671: PetscCall(PetscLayoutSetUp(a->cmat->rmap));
1672: c->sub_rbegin = rbegin;
1673: c->sub_rend = rend;
1674: }
1675: if (c->sub_cbegin != cbegin || c->sub_cend != cend) {
1676: // special optimization: check if all columns are owned by rank 0, in which case no communication is necessary
1677: if ((cend - cbegin != a->cmat->cmap->N) || (A->cmap->range[1] != A->cmap->N)) {
1678: PetscCall(PetscLayoutDestroy(&a->cmat->cmap));
1679: PetscCall(PetscLayoutCreate(comm, &a->cmat->cmap));
1680: PetscCall(PetscLayoutSetLocalSize(a->cmat->cmap, pcend - pcbegin));
1681: PetscCall(PetscLayoutSetSize(a->cmat->cmap, cend - cbegin));
1682: PetscCall(PetscLayoutSetUp(a->cmat->cmap));
1683: PetscCall(VecDestroy(&c->lvec));
1684: PetscCall(PetscSFDestroy(&c->Mvctx));
1685: }
1686: c->sub_cbegin = cbegin;
1687: c->sub_cend = cend;
1688: }
1689: PetscCheck(!c->A, comm, PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first");
1690: PetscCall(MatDenseGetSubMatrix(a->A, prbegin, prend, cbegin, cend, &c->A));
1692: a->cmat->preallocated = PETSC_TRUE;
1693: a->cmat->assembled = PETSC_TRUE;
1694: #if defined(PETSC_HAVE_DEVICE)
1695: a->cmat->offloadmask = c->A->offloadmask;
1696: #endif
1697: a->matinuse = cbegin + 1;
1698: *v = a->cmat;
1699: PetscFunctionReturn(PETSC_SUCCESS);
1700: }
1702: static PetscErrorCode MatDenseRestoreSubMatrix_MPIDense(Mat A, Mat *v)
1703: {
1704: Mat_MPIDense *a = (Mat_MPIDense *)A->data;
1705: Mat_MPIDense *c;
1707: PetscFunctionBegin;
1708: PetscCheck(a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseGetSubMatrix() first");
1709: PetscCheck(a->cmat, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing internal matrix");
1710: PetscCheck(*v == a->cmat, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Not the matrix obtained from MatDenseGetSubMatrix()");
1711: a->matinuse = 0;
1712: c = (Mat_MPIDense *)a->cmat->data;
1713: PetscCall(MatDenseRestoreSubMatrix(a->A, &c->A));
1714: if (v) *v = NULL;
1715: #if defined(PETSC_HAVE_DEVICE)
1716: A->offloadmask = a->A->offloadmask;
1717: #endif
1718: PetscFunctionReturn(PETSC_SUCCESS);
1719: }
1721: /*MC
1722: MATMPIDENSE - MATMPIDENSE = "mpidense" - A matrix type to be used for distributed dense matrices.
1724: Options Database Key:
1725: . -mat_type mpidense - sets the matrix type to `MATMPIDENSE` during a call to `MatSetFromOptions()`
1727: Level: beginner
1729: .seealso: [](ch_matrices), `Mat`, `MatCreateDense()`, `MATSEQDENSE`, `MATDENSE`
1730: M*/
1731: PetscErrorCode MatCreate_MPIDense(Mat mat)
1732: {
1733: Mat_MPIDense *a;
1735: PetscFunctionBegin;
1736: PetscCall(PetscNew(&a));
1737: mat->data = (void *)a;
1738: mat->ops[0] = MatOps_Values;
1740: mat->insertmode = NOT_SET_VALUES;
1742: /* build cache for off array entries formed */
1743: a->donotstash = PETSC_FALSE;
1745: PetscCall(MatStashCreate_Private(PetscObjectComm((PetscObject)mat), 1, &mat->stash));
1747: /* stuff used for matrix vector multiply */
1748: a->lvec = NULL;
1749: a->Mvctx = NULL;
1750: a->roworiented = PETSC_TRUE;
1752: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetLDA_C", MatDenseGetLDA_MPIDense));
1753: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseSetLDA_C", MatDenseSetLDA_MPIDense));
1754: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArray_C", MatDenseGetArray_MPIDense));
1755: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArray_C", MatDenseRestoreArray_MPIDense));
1756: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArrayRead_C", MatDenseGetArrayRead_MPIDense));
1757: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArrayRead_C", MatDenseRestoreArrayRead_MPIDense));
1758: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArrayWrite_C", MatDenseGetArrayWrite_MPIDense));
1759: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArrayWrite_C", MatDenseRestoreArrayWrite_MPIDense));
1760: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDensePlaceArray_C", MatDensePlaceArray_MPIDense));
1761: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseResetArray_C", MatDenseResetArray_MPIDense));
1762: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseReplaceArray_C", MatDenseReplaceArray_MPIDense));
1763: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVec_C", MatDenseGetColumnVec_MPIDense));
1764: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVec_C", MatDenseRestoreColumnVec_MPIDense));
1765: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVecRead_C", MatDenseGetColumnVecRead_MPIDense));
1766: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVecRead_C", MatDenseRestoreColumnVecRead_MPIDense));
1767: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVecWrite_C", MatDenseGetColumnVecWrite_MPIDense));
1768: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVecWrite_C", MatDenseRestoreColumnVecWrite_MPIDense));
1769: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetSubMatrix_C", MatDenseGetSubMatrix_MPIDense));
1770: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreSubMatrix_C", MatDenseRestoreSubMatrix_MPIDense));
1771: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpiaij_mpidense_C", MatConvert_MPIAIJ_MPIDense));
1772: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpiaij_C", MatConvert_MPIDense_MPIAIJ));
1773: #if defined(PETSC_HAVE_ELEMENTAL)
1774: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_elemental_C", MatConvert_MPIDense_Elemental));
1775: #endif
1776: #if defined(PETSC_HAVE_SCALAPACK)
1777: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_scalapack_C", MatConvert_Dense_ScaLAPACK));
1778: #endif
1779: #if defined(PETSC_HAVE_CUDA)
1780: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpidensecuda_C", MatConvert_MPIDense_MPIDenseCUDA));
1781: #endif
1782: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMPIDenseSetPreallocation_C", MatMPIDenseSetPreallocation_MPIDense));
1783: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaij_mpidense_C", MatProductSetFromOptions_MPIAIJ_MPIDense));
1784: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaij_C", MatProductSetFromOptions_MPIDense_MPIAIJ));
1785: #if defined(PETSC_HAVE_CUDA)
1786: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijcusparse_mpidense_C", MatProductSetFromOptions_MPIAIJ_MPIDense));
1787: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaijcusparse_C", MatProductSetFromOptions_MPIDense_MPIAIJ));
1788: #endif
1789: #if defined(PETSC_HAVE_HIP)
1790: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpidensehip_C", MatConvert_MPIDense_MPIDenseHIP));
1791: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijhipsparse_mpidense_C", MatProductSetFromOptions_MPIAIJ_MPIDense));
1792: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaijhipsparse_C", MatProductSetFromOptions_MPIDense_MPIAIJ));
1793: #endif
1794: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumn_C", MatDenseGetColumn_MPIDense));
1795: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumn_C", MatDenseRestoreColumn_MPIDense));
1796: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMultColumnRange_C", MatMultColumnRange_MPIDense));
1797: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMultAddColumnRange_C", MatMultAddColumnRange_MPIDense));
1798: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMultHermitianTransposeColumnRange_C", MatMultHermitianTransposeColumnRange_MPIDense));
1799: PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMultHermitianTransposeAddColumnRange_C", MatMultHermitianTransposeAddColumnRange_MPIDense));
1800: PetscCall(PetscObjectChangeTypeName((PetscObject)mat, MATMPIDENSE));
1801: PetscFunctionReturn(PETSC_SUCCESS);
1802: }
1804: /*MC
1805: MATDENSE - MATDENSE = "dense" - A matrix type to be used for dense matrices.
1807: This matrix type is identical to `MATSEQDENSE` when constructed with a single process communicator,
1808: and `MATMPIDENSE` otherwise.
1810: Options Database Key:
1811: . -mat_type dense - sets the matrix type to `MATDENSE` during a call to `MatSetFromOptions()`
1813: Level: beginner
1815: .seealso: [](ch_matrices), `Mat`, `MATSEQDENSE`, `MATMPIDENSE`, `MATDENSECUDA`, `MATDENSEHIP`
1816: M*/
1818: /*@
1819: MatMPIDenseSetPreallocation - Sets the array used to store the matrix entries
1821: Collective
1823: Input Parameters:
1824: + B - the matrix
1825: - data - optional location of matrix data. Set to `NULL` for PETSc
1826: to control all matrix memory allocation.
1828: Level: intermediate
1830: Notes:
1831: The dense format is fully compatible with standard Fortran
1832: storage by columns.
1834: The data input variable is intended primarily for Fortran programmers
1835: who wish to allocate their own matrix memory space. Most users should
1836: set `data` to `NULL`.
1838: .seealso: [](ch_matrices), `Mat`, `MATMPIDENSE`, `MatCreate()`, `MatCreateSeqDense()`, `MatSetValues()`
1839: @*/
1840: PetscErrorCode MatMPIDenseSetPreallocation(Mat B, PetscScalar *data)
1841: {
1842: PetscFunctionBegin;
1844: PetscTryMethod(B, "MatMPIDenseSetPreallocation_C", (Mat, PetscScalar *), (B, data));
1845: PetscFunctionReturn(PETSC_SUCCESS);
1846: }
1848: /*@
1849: MatDensePlaceArray - Allows one to replace the array in a `MATDENSE` matrix with an
1850: array provided by the user. This is useful to avoid copying an array
1851: into a matrix
1853: Not Collective
1855: Input Parameters:
1856: + mat - the matrix
1857: - array - the array in column major order
1859: Level: developer
1861: Note:
1862: Adding `const` to `array` was an oversight, see notes in `VecPlaceArray()`.
1864: You can return to the original array with a call to `MatDenseResetArray()`. The user is responsible for freeing this array; it will not be
1865: freed when the matrix is destroyed.
1867: .seealso: [](ch_matrices), `Mat`, `MATDENSE`, `MatDenseGetArray()`, `MatDenseResetArray()`, `VecPlaceArray()`, `VecGetArray()`, `VecRestoreArray()`, `VecReplaceArray()`, `VecResetArray()`,
1868: `MatDenseReplaceArray()`
1869: @*/
1870: PetscErrorCode MatDensePlaceArray(Mat mat, const PetscScalar *array)
1871: {
1872: PetscFunctionBegin;
1874: PetscUseMethod(mat, "MatDensePlaceArray_C", (Mat, const PetscScalar *), (mat, array));
1875: PetscCall(PetscObjectStateIncrease((PetscObject)mat));
1876: #if defined(PETSC_HAVE_CUDA) || defined(PETSC_HAVE_HIP)
1877: mat->offloadmask = PETSC_OFFLOAD_CPU;
1878: #endif
1879: PetscFunctionReturn(PETSC_SUCCESS);
1880: }
1882: /*@
1883: MatDenseResetArray - Resets the matrix array to that it previously had before the call to `MatDensePlaceArray()`
1885: Not Collective
1887: Input Parameter:
1888: . mat - the matrix
1890: Level: developer
1892: Note:
1893: You can only call this after a call to `MatDensePlaceArray()`
1895: .seealso: [](ch_matrices), `Mat`, `MATDENSE`, `MatDenseGetArray()`, `MatDensePlaceArray()`, `VecPlaceArray()`, `VecGetArray()`, `VecRestoreArray()`, `VecReplaceArray()`, `VecResetArray()`
1896: @*/
1897: PetscErrorCode MatDenseResetArray(Mat mat)
1898: {
1899: PetscFunctionBegin;
1901: PetscUseMethod(mat, "MatDenseResetArray_C", (Mat), (mat));
1902: PetscCall(PetscObjectStateIncrease((PetscObject)mat));
1903: PetscFunctionReturn(PETSC_SUCCESS);
1904: }
1906: /*@
1907: MatDenseReplaceArray - Allows one to replace the array in a dense matrix with an
1908: array provided by the user. This is useful to avoid copying an array
1909: into a matrix
1911: Not Collective
1913: Input Parameters:
1914: + mat - the matrix
1915: - array - the array in column major order
1917: Level: developer
1919: Note:
1920: Adding `const` to `array` was an oversight, see notes in `VecPlaceArray()`.
1922: The memory passed in MUST be obtained with `PetscMalloc()` and CANNOT be
1923: freed by the user. It will be freed when the matrix is destroyed.
1925: .seealso: [](ch_matrices), `Mat`, `MatDensePlaceArray()`, `MatDenseGetArray()`, `VecReplaceArray()`
1926: @*/
1927: PetscErrorCode MatDenseReplaceArray(Mat mat, const PetscScalar *array)
1928: {
1929: PetscFunctionBegin;
1931: PetscUseMethod(mat, "MatDenseReplaceArray_C", (Mat, const PetscScalar *), (mat, array));
1932: PetscCall(PetscObjectStateIncrease((PetscObject)mat));
1933: #if defined(PETSC_HAVE_CUDA) || defined(PETSC_HAVE_HIP)
1934: mat->offloadmask = PETSC_OFFLOAD_CPU;
1935: #endif
1936: PetscFunctionReturn(PETSC_SUCCESS);
1937: }
1939: /*@
1940: MatCreateDense - Creates a matrix in `MATDENSE` format.
1942: Collective
1944: Input Parameters:
1945: + comm - MPI communicator
1946: . m - number of local rows (or `PETSC_DECIDE` to have calculated if `M` is given)
1947: . n - number of local columns (or `PETSC_DECIDE` to have calculated if `N` is given)
1948: . M - number of global rows (or `PETSC_DECIDE` to have calculated if `m` is given)
1949: . N - number of global columns (or `PETSC_DECIDE` to have calculated if `n` is given)
1950: - data - optional location of matrix data. Set data to `NULL` (`PETSC_NULL_SCALAR_ARRAY` for Fortran users) for PETSc
1951: to control all matrix memory allocation.
1953: Output Parameter:
1954: . A - the matrix
1956: Level: intermediate
1958: Notes:
1959: The dense format is fully compatible with standard Fortran
1960: storage by columns.
1962: Although local portions of the matrix are stored in column-major
1963: order, the matrix is partitioned across MPI ranks by row.
1965: The data input variable is intended primarily for Fortran programmers
1966: who wish to allocate their own matrix memory space. Most users should
1967: set `data` to `NULL` (`PETSC_NULL_SCALAR_ARRAY` for Fortran users).
1969: The user MUST specify either the local or global matrix dimensions
1970: (possibly both).
1972: .seealso: [](ch_matrices), `Mat`, `MATDENSE`, `MatCreate()`, `MatCreateSeqDense()`, `MatSetValues()`
1973: @*/
1974: PetscErrorCode MatCreateDense(MPI_Comm comm, PetscInt m, PetscInt n, PetscInt M, PetscInt N, PetscScalar data[], Mat *A)
1975: {
1976: PetscFunctionBegin;
1977: PetscCall(MatCreate(comm, A));
1978: PetscCall(MatSetSizes(*A, m, n, M, N));
1979: PetscCall(MatSetType(*A, MATDENSE));
1980: PetscCall(MatSeqDenseSetPreallocation(*A, data));
1981: PetscCall(MatMPIDenseSetPreallocation(*A, data));
1982: PetscFunctionReturn(PETSC_SUCCESS);
1983: }
1985: static PetscErrorCode MatDuplicate_MPIDense(Mat A, MatDuplicateOption cpvalues, Mat *newmat)
1986: {
1987: Mat mat;
1988: Mat_MPIDense *a, *oldmat = (Mat_MPIDense *)A->data;
1990: PetscFunctionBegin;
1991: *newmat = NULL;
1992: PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &mat));
1993: PetscCall(MatSetSizes(mat, A->rmap->n, A->cmap->n, A->rmap->N, A->cmap->N));
1994: PetscCall(MatSetType(mat, ((PetscObject)A)->type_name));
1995: a = (Mat_MPIDense *)mat->data;
1997: mat->factortype = A->factortype;
1998: mat->assembled = PETSC_TRUE;
1999: mat->preallocated = PETSC_TRUE;
2001: mat->insertmode = NOT_SET_VALUES;
2002: a->donotstash = oldmat->donotstash;
2004: PetscCall(PetscLayoutReference(A->rmap, &mat->rmap));
2005: PetscCall(PetscLayoutReference(A->cmap, &mat->cmap));
2007: PetscCall(MatDuplicate(oldmat->A, cpvalues, &a->A));
2009: *newmat = mat;
2010: PetscFunctionReturn(PETSC_SUCCESS);
2011: }
2013: static PetscErrorCode MatLoad_MPIDense(Mat newMat, PetscViewer viewer)
2014: {
2015: PetscBool isbinary;
2016: #if defined(PETSC_HAVE_HDF5)
2017: PetscBool ishdf5;
2018: #endif
2020: PetscFunctionBegin;
2023: /* force binary viewer to load .info file if it has not yet done so */
2024: PetscCall(PetscViewerSetUp(viewer));
2025: PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERBINARY, &isbinary));
2026: #if defined(PETSC_HAVE_HDF5)
2027: PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERHDF5, &ishdf5));
2028: #endif
2029: if (isbinary) {
2030: PetscCall(MatLoad_Dense_Binary(newMat, viewer));
2031: #if defined(PETSC_HAVE_HDF5)
2032: } else if (ishdf5) {
2033: PetscCall(MatLoad_Dense_HDF5(newMat, viewer));
2034: #endif
2035: } else SETERRQ(PetscObjectComm((PetscObject)newMat), PETSC_ERR_SUP, "Viewer type %s not yet supported for reading %s matrices", ((PetscObject)viewer)->type_name, ((PetscObject)newMat)->type_name);
2036: PetscFunctionReturn(PETSC_SUCCESS);
2037: }
2039: static PetscErrorCode MatEqual_MPIDense(Mat A, Mat B, PetscBool *flag)
2040: {
2041: Mat_MPIDense *matB = (Mat_MPIDense *)B->data, *matA = (Mat_MPIDense *)A->data;
2042: Mat a, b;
2044: PetscFunctionBegin;
2045: a = matA->A;
2046: b = matB->A;
2047: PetscCall(MatEqual(a, b, flag));
2048: PetscCallMPI(MPIU_Allreduce(MPI_IN_PLACE, flag, 1, MPIU_BOOL, MPI_LAND, PetscObjectComm((PetscObject)A)));
2049: PetscFunctionReturn(PETSC_SUCCESS);
2050: }
2052: static PetscErrorCode MatDestroy_MatTransMatMult_MPIDense_MPIDense(void *data)
2053: {
2054: Mat_TransMatMultDense *atb = (Mat_TransMatMultDense *)data;
2056: PetscFunctionBegin;
2057: PetscCall(PetscFree2(atb->sendbuf, atb->recvcounts));
2058: PetscCall(MatDestroy(&atb->atb));
2059: PetscCall(PetscFree(atb));
2060: PetscFunctionReturn(PETSC_SUCCESS);
2061: }
2063: static PetscErrorCode MatDestroy_MatMatTransMult_MPIDense_MPIDense(void *data)
2064: {
2065: Mat_MatTransMultDense *abt = (Mat_MatTransMultDense *)data;
2067: PetscFunctionBegin;
2068: PetscCall(PetscFree2(abt->buf[0], abt->buf[1]));
2069: PetscCall(PetscFree2(abt->recvcounts, abt->recvdispls));
2070: PetscCall(PetscFree(abt));
2071: PetscFunctionReturn(PETSC_SUCCESS);
2072: }
2074: static PetscErrorCode MatTransposeMatMultNumeric_MPIDense_MPIDense(Mat A, Mat B, Mat C)
2075: {
2076: Mat_MPIDense *a = (Mat_MPIDense *)A->data, *b = (Mat_MPIDense *)B->data, *c = (Mat_MPIDense *)C->data;
2077: Mat_TransMatMultDense *atb;
2078: MPI_Comm comm;
2079: PetscMPIInt size, *recvcounts;
2080: PetscScalar *carray, *sendbuf;
2081: const PetscScalar *atbarray;
2082: PetscInt i, cN = C->cmap->N, proc, k, j, lda;
2083: const PetscInt *ranges;
2085: PetscFunctionBegin;
2086: MatCheckProduct(C, 3);
2087: PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data empty");
2088: atb = (Mat_TransMatMultDense *)C->product->data;
2089: recvcounts = atb->recvcounts;
2090: sendbuf = atb->sendbuf;
2092: PetscCall(PetscObjectGetComm((PetscObject)A, &comm));
2093: PetscCallMPI(MPI_Comm_size(comm, &size));
2095: /* compute atbarray = aseq^T * bseq */
2096: PetscCall(MatTransposeMatMult(a->A, b->A, atb->atb ? MAT_REUSE_MATRIX : MAT_INITIAL_MATRIX, PETSC_DETERMINE, &atb->atb));
2098: PetscCall(MatGetOwnershipRanges(C, &ranges));
2100: if (ranges[1] == C->rmap->N) {
2101: /* all of the values are being reduced to rank 0: optimize this case to use MPI_Reduce and GPU aware MPI if available */
2102: PetscInt atb_lda, c_lda;
2103: Mat atb_local = atb->atb;
2104: Mat atb_alloc = NULL;
2105: Mat c_local = c->A;
2106: Mat c_alloc = NULL;
2107: PetscMemType atb_memtype, c_memtype;
2108: const PetscScalar *atb_array = NULL;
2109: MPI_Datatype vector_type;
2110: PetscScalar *c_array = NULL;
2111: PetscMPIInt rank;
2113: PetscCallMPI(MPI_Comm_rank(comm, &rank));
2115: PetscCall(MatDenseGetLDA(atb_local, &atb_lda));
2116: if (atb_lda != C->rmap->N) {
2117: // copy atb to a matrix that will have lda == the number of rows
2118: PetscCall(MatDuplicate(atb_local, MAT_DO_NOT_COPY_VALUES, &atb_alloc));
2119: PetscCall(MatCopy(atb_local, atb_alloc, DIFFERENT_NONZERO_PATTERN));
2120: atb_local = atb_alloc;
2121: }
2123: if (rank == 0) {
2124: PetscCall(MatDenseGetLDA(c_local, &c_lda));
2125: if (c_lda != C->rmap->N) {
2126: // copy c to a matrix that will have lda == the number of rows
2127: PetscCall(MatDuplicate(c_local, MAT_DO_NOT_COPY_VALUES, &c_alloc));
2128: c_local = c_alloc;
2129: }
2130: PetscCall(MatZeroEntries(c_local));
2131: }
2132: /* atb_local and c_local have nrows = lda = A->cmap->N and ncols =
2133: * B->cmap->N: use the a->Mvctx to use the best reduction method */
2134: if (!a->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A));
2135: vector_type = MPIU_SCALAR;
2136: if (B->cmap->N > 1) {
2137: PetscMPIInt mpi_N;
2139: PetscCall(PetscMPIIntCast(B->cmap->N, &mpi_N));
2140: PetscCallMPI(MPI_Type_contiguous(mpi_N, MPIU_SCALAR, &vector_type));
2141: PetscCallMPI(MPI_Type_commit(&vector_type));
2142: }
2143: PetscCall(MatDenseGetArrayReadAndMemType(atb_local, &atb_array, &atb_memtype));
2144: PetscCall(MatDenseGetArrayWriteAndMemType(c_local, &c_array, &c_memtype));
2145: PetscCall(PetscSFReduceWithMemTypeBegin(a->Mvctx, vector_type, atb_memtype, atb_array, c_memtype, c_array, MPIU_SUM));
2146: PetscCall(PetscSFReduceEnd(a->Mvctx, vector_type, atb_array, c_array, MPIU_SUM));
2147: PetscCall(MatDenseRestoreArrayWriteAndMemType(c_local, &c_array));
2148: PetscCall(MatDenseRestoreArrayReadAndMemType(atb_local, &atb_array));
2149: if (rank == 0 && c_local != c->A) PetscCall(MatCopy(c_local, c->A, DIFFERENT_NONZERO_PATTERN));
2150: if (B->cmap->N > 1) PetscCallMPI(MPI_Type_free(&vector_type));
2151: PetscCall(MatDestroy(&atb_alloc));
2152: PetscCall(MatDestroy(&c_alloc));
2153: PetscCall(MatSetOption(C, MAT_NO_OFF_PROC_ENTRIES, PETSC_TRUE));
2154: PetscCall(MatAssemblyBegin(C, MAT_FINAL_ASSEMBLY));
2155: PetscCall(MatAssemblyEnd(C, MAT_FINAL_ASSEMBLY));
2156: PetscFunctionReturn(PETSC_SUCCESS);
2157: }
2159: /* arrange atbarray into sendbuf */
2160: PetscCall(MatDenseGetArrayRead(atb->atb, &atbarray));
2161: PetscCall(MatDenseGetLDA(atb->atb, &lda));
2162: for (proc = 0, k = 0; proc < size; proc++) {
2163: for (j = 0; j < cN; j++) {
2164: for (i = ranges[proc]; i < ranges[proc + 1]; i++) sendbuf[k++] = atbarray[i + j * lda];
2165: }
2166: }
2167: PetscCall(MatDenseRestoreArrayRead(atb->atb, &atbarray));
2169: /* sum all atbarray to local values of C */
2170: PetscCall(MatDenseGetArrayWrite(c->A, &carray));
2171: PetscCallMPI(MPI_Reduce_scatter(sendbuf, carray, recvcounts, MPIU_SCALAR, MPIU_SUM, comm));
2172: PetscCall(MatDenseRestoreArrayWrite(c->A, &carray));
2173: PetscCall(MatSetOption(C, MAT_NO_OFF_PROC_ENTRIES, PETSC_TRUE));
2174: PetscCall(MatAssemblyBegin(C, MAT_FINAL_ASSEMBLY));
2175: PetscCall(MatAssemblyEnd(C, MAT_FINAL_ASSEMBLY));
2176: PetscFunctionReturn(PETSC_SUCCESS);
2177: }
2179: static PetscErrorCode MatTransposeMatMultSymbolic_MPIDense_MPIDense(Mat A, Mat B, PetscReal fill, Mat C)
2180: {
2181: MPI_Comm comm;
2182: PetscMPIInt size;
2183: PetscInt cm = A->cmap->n, cM, cN = B->cmap->N;
2184: Mat_TransMatMultDense *atb;
2185: PetscBool cisdense = PETSC_FALSE;
2186: const PetscInt *ranges;
2188: PetscFunctionBegin;
2189: MatCheckProduct(C, 4);
2190: PetscCheck(!C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data not empty");
2191: PetscCall(PetscObjectGetComm((PetscObject)A, &comm));
2192: PetscCheck(A->rmap->rstart == B->rmap->rstart && A->rmap->rend == B->rmap->rend, comm, PETSC_ERR_ARG_SIZ, "Matrix local dimensions are incompatible, A (%" PetscInt_FMT ", %" PetscInt_FMT ") != B (%" PetscInt_FMT ",%" PetscInt_FMT ")", A->rmap->rstart,
2193: A->rmap->rend, B->rmap->rstart, B->rmap->rend);
2195: /* create matrix product C */
2196: PetscCall(MatSetSizes(C, cm, B->cmap->n, A->cmap->N, B->cmap->N));
2197: #if defined(PETSC_HAVE_CUDA)
2198: PetscCall(PetscObjectTypeCompareAny((PetscObject)C, &cisdense, MATMPIDENSE, MATMPIDENSECUDA, ""));
2199: #endif
2200: #if defined(PETSC_HAVE_HIP)
2201: PetscCall(PetscObjectTypeCompareAny((PetscObject)C, &cisdense, MATMPIDENSE, MATMPIDENSEHIP, ""));
2202: #endif
2203: if (!cisdense) PetscCall(MatSetType(C, ((PetscObject)A)->type_name));
2204: PetscCall(MatSetUp(C));
2206: /* create data structure for reuse C */
2207: PetscCallMPI(MPI_Comm_size(comm, &size));
2208: PetscCall(PetscNew(&atb));
2209: cM = C->rmap->N;
2210: PetscCall(PetscMalloc2(cM * cN, &atb->sendbuf, size, &atb->recvcounts));
2211: PetscCall(MatGetOwnershipRanges(C, &ranges));
2212: for (PetscMPIInt i = 0; i < size; i++) PetscCall(PetscMPIIntCast((ranges[i + 1] - ranges[i]) * cN, &atb->recvcounts[i]));
2213: C->product->data = atb;
2214: C->product->destroy = MatDestroy_MatTransMatMult_MPIDense_MPIDense;
2215: PetscFunctionReturn(PETSC_SUCCESS);
2216: }
2218: static PetscErrorCode MatMatTransposeMultSymbolic_MPIDense_MPIDense(Mat A, Mat B, PetscReal fill, Mat C)
2219: {
2220: MPI_Comm comm;
2221: PetscMPIInt i, size;
2222: PetscInt maxRows, bufsiz;
2223: PetscMPIInt tag;
2224: PetscInt alg;
2225: Mat_MatTransMultDense *abt;
2226: Mat_Product *product = C->product;
2227: PetscBool flg;
2229: PetscFunctionBegin;
2230: MatCheckProduct(C, 4);
2231: PetscCheck(!C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data not empty");
2232: /* check local size of A and B */
2233: PetscCheck(A->cmap->n == B->cmap->n, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Matrix local column dimensions are incompatible, A (%" PetscInt_FMT ") != B (%" PetscInt_FMT ")", A->cmap->n, B->cmap->n);
2235: PetscCall(PetscStrcmp(product->alg, "allgatherv", &flg));
2236: alg = flg ? 0 : 1;
2238: /* setup matrix product C */
2239: PetscCall(MatSetSizes(C, A->rmap->n, B->rmap->n, A->rmap->N, B->rmap->N));
2240: PetscCall(MatSetType(C, MATMPIDENSE));
2241: PetscCall(MatSetUp(C));
2242: PetscCall(PetscObjectGetNewTag((PetscObject)C, &tag));
2244: /* create data structure for reuse C */
2245: PetscCall(PetscObjectGetComm((PetscObject)C, &comm));
2246: PetscCallMPI(MPI_Comm_size(comm, &size));
2247: PetscCall(PetscNew(&abt));
2248: abt->tag = tag;
2249: abt->alg = alg;
2250: switch (alg) {
2251: case 1: /* alg: "cyclic" */
2252: for (maxRows = 0, i = 0; i < size; i++) maxRows = PetscMax(maxRows, B->rmap->range[i + 1] - B->rmap->range[i]);
2253: bufsiz = A->cmap->N * maxRows;
2254: PetscCall(PetscMalloc2(bufsiz, &abt->buf[0], bufsiz, &abt->buf[1]));
2255: break;
2256: default: /* alg: "allgatherv" */
2257: PetscCall(PetscMalloc2(B->rmap->n * B->cmap->N, &abt->buf[0], B->rmap->N * B->cmap->N, &abt->buf[1]));
2258: PetscCall(PetscMalloc2(size, &abt->recvcounts, size + 1, &abt->recvdispls));
2259: for (i = 0; i <= size; i++) PetscCall(PetscMPIIntCast(B->rmap->range[i] * A->cmap->N, &abt->recvdispls[i]));
2260: for (i = 0; i < size; i++) PetscCall(PetscMPIIntCast(abt->recvdispls[i + 1] - abt->recvdispls[i], &abt->recvcounts[i]));
2261: break;
2262: }
2264: C->product->data = abt;
2265: C->product->destroy = MatDestroy_MatMatTransMult_MPIDense_MPIDense;
2266: C->ops->mattransposemultnumeric = MatMatTransposeMultNumeric_MPIDense_MPIDense;
2267: PetscFunctionReturn(PETSC_SUCCESS);
2268: }
2270: static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense_Cyclic(Mat A, Mat B, Mat C)
2271: {
2272: Mat_MPIDense *a = (Mat_MPIDense *)A->data, *b = (Mat_MPIDense *)B->data, *c = (Mat_MPIDense *)C->data;
2273: Mat_MatTransMultDense *abt;
2274: MPI_Comm comm;
2275: PetscMPIInt rank, size, sendto, recvfrom, recvisfrom;
2276: PetscScalar *sendbuf, *recvbuf = NULL, *cv;
2277: PetscInt i, cK = A->cmap->N, sendsiz, recvsiz, k, j, bn;
2278: PetscScalar _DOne = 1.0, _DZero = 0.0;
2279: const PetscScalar *av, *bv;
2280: PetscBLASInt cm, cn, ck, alda, blda = 0, clda;
2281: MPI_Request reqs[2];
2282: const PetscInt *ranges;
2284: PetscFunctionBegin;
2285: MatCheckProduct(C, 3);
2286: PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data empty");
2287: abt = (Mat_MatTransMultDense *)C->product->data;
2288: PetscCall(PetscObjectGetComm((PetscObject)C, &comm));
2289: PetscCallMPI(MPI_Comm_rank(comm, &rank));
2290: PetscCallMPI(MPI_Comm_size(comm, &size));
2291: PetscCall(MatDenseGetArrayRead(a->A, &av));
2292: PetscCall(MatDenseGetArrayRead(b->A, &bv));
2293: PetscCall(MatDenseGetArrayWrite(c->A, &cv));
2294: PetscCall(MatDenseGetLDA(a->A, &i));
2295: PetscCall(PetscBLASIntCast(i, &alda));
2296: PetscCall(MatDenseGetLDA(b->A, &i));
2297: PetscCall(PetscBLASIntCast(i, &blda));
2298: PetscCall(MatDenseGetLDA(c->A, &i));
2299: PetscCall(PetscBLASIntCast(i, &clda));
2300: PetscCall(MatGetOwnershipRanges(B, &ranges));
2301: bn = B->rmap->n;
2302: if (blda == bn) {
2303: sendbuf = (PetscScalar *)bv;
2304: } else {
2305: sendbuf = abt->buf[0];
2306: for (k = 0, i = 0; i < cK; i++) {
2307: for (j = 0; j < bn; j++, k++) sendbuf[k] = bv[i * blda + j];
2308: }
2309: }
2310: if (size > 1) {
2311: sendto = (rank + size - 1) % size;
2312: recvfrom = (rank + size + 1) % size;
2313: } else {
2314: sendto = recvfrom = 0;
2315: }
2316: PetscCall(PetscBLASIntCast(cK, &ck));
2317: PetscCall(PetscBLASIntCast(c->A->rmap->n, &cm));
2318: recvisfrom = rank;
2319: for (i = 0; i < size; i++) {
2320: /* we have finished receiving in sending, bufs can be read/modified */
2321: PetscMPIInt nextrecvisfrom = (recvisfrom + 1) % size; /* which process the next recvbuf will originate on */
2322: PetscInt nextbn = ranges[nextrecvisfrom + 1] - ranges[nextrecvisfrom];
2324: if (nextrecvisfrom != rank) {
2325: /* start the cyclic sends from sendbuf, to recvbuf (which will switch to sendbuf) */
2326: sendsiz = cK * bn;
2327: recvsiz = cK * nextbn;
2328: recvbuf = (i & 1) ? abt->buf[0] : abt->buf[1];
2329: PetscCallMPI(MPIU_Isend(sendbuf, sendsiz, MPIU_SCALAR, sendto, abt->tag, comm, &reqs[0]));
2330: PetscCallMPI(MPIU_Irecv(recvbuf, recvsiz, MPIU_SCALAR, recvfrom, abt->tag, comm, &reqs[1]));
2331: }
2333: /* local aseq * sendbuf^T */
2334: PetscCall(PetscBLASIntCast(ranges[recvisfrom + 1] - ranges[recvisfrom], &cn));
2335: if (cm && cn && ck) PetscCallBLAS("BLASgemm", BLASgemm_("N", "T", &cm, &cn, &ck, &_DOne, av, &alda, sendbuf, &cn, &_DZero, cv + clda * ranges[recvisfrom], &clda));
2337: if (nextrecvisfrom != rank) {
2338: /* wait for the sends and receives to complete, swap sendbuf and recvbuf */
2339: PetscCallMPI(MPI_Waitall(2, reqs, MPI_STATUSES_IGNORE));
2340: }
2341: bn = nextbn;
2342: recvisfrom = nextrecvisfrom;
2343: sendbuf = recvbuf;
2344: }
2345: PetscCall(MatDenseRestoreArrayRead(a->A, &av));
2346: PetscCall(MatDenseRestoreArrayRead(b->A, &bv));
2347: PetscCall(MatDenseRestoreArrayWrite(c->A, &cv));
2348: PetscCall(MatSetOption(C, MAT_NO_OFF_PROC_ENTRIES, PETSC_TRUE));
2349: PetscCall(MatAssemblyBegin(C, MAT_FINAL_ASSEMBLY));
2350: PetscCall(MatAssemblyEnd(C, MAT_FINAL_ASSEMBLY));
2351: PetscFunctionReturn(PETSC_SUCCESS);
2352: }
2354: static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense_Allgatherv(Mat A, Mat B, Mat C)
2355: {
2356: Mat_MPIDense *a = (Mat_MPIDense *)A->data, *b = (Mat_MPIDense *)B->data, *c = (Mat_MPIDense *)C->data;
2357: Mat_MatTransMultDense *abt;
2358: MPI_Comm comm;
2359: PetscMPIInt size, ibn;
2360: PetscScalar *cv, *sendbuf, *recvbuf;
2361: const PetscScalar *av, *bv;
2362: PetscInt blda, i, cK = A->cmap->N, k, j, bn;
2363: PetscScalar _DOne = 1.0, _DZero = 0.0;
2364: PetscBLASInt cm, cn, ck, alda, clda;
2366: PetscFunctionBegin;
2367: MatCheckProduct(C, 3);
2368: PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data empty");
2369: abt = (Mat_MatTransMultDense *)C->product->data;
2370: PetscCall(PetscObjectGetComm((PetscObject)A, &comm));
2371: PetscCallMPI(MPI_Comm_size(comm, &size));
2372: PetscCall(MatDenseGetArrayRead(a->A, &av));
2373: PetscCall(MatDenseGetArrayRead(b->A, &bv));
2374: PetscCall(MatDenseGetArrayWrite(c->A, &cv));
2375: PetscCall(MatDenseGetLDA(a->A, &i));
2376: PetscCall(PetscBLASIntCast(i, &alda));
2377: PetscCall(MatDenseGetLDA(b->A, &blda));
2378: PetscCall(MatDenseGetLDA(c->A, &i));
2379: PetscCall(PetscBLASIntCast(i, &clda));
2380: /* copy transpose of B into buf[0] */
2381: bn = B->rmap->n;
2382: sendbuf = abt->buf[0];
2383: recvbuf = abt->buf[1];
2384: for (k = 0, j = 0; j < bn; j++) {
2385: for (i = 0; i < cK; i++, k++) sendbuf[k] = bv[i * blda + j];
2386: }
2387: PetscCall(MatDenseRestoreArrayRead(b->A, &bv));
2388: PetscCall(PetscMPIIntCast(bn * cK, &ibn));
2389: PetscCallMPI(MPI_Allgatherv(sendbuf, ibn, MPIU_SCALAR, recvbuf, abt->recvcounts, abt->recvdispls, MPIU_SCALAR, comm));
2390: PetscCall(PetscBLASIntCast(cK, &ck));
2391: PetscCall(PetscBLASIntCast(c->A->rmap->n, &cm));
2392: PetscCall(PetscBLASIntCast(c->A->cmap->n, &cn));
2393: if (cm && cn && ck) PetscCallBLAS("BLASgemm", BLASgemm_("N", "N", &cm, &cn, &ck, &_DOne, av, &alda, recvbuf, &ck, &_DZero, cv, &clda));
2394: PetscCall(MatDenseRestoreArrayRead(a->A, &av));
2395: PetscCall(MatDenseRestoreArrayRead(b->A, &bv));
2396: PetscCall(MatDenseRestoreArrayWrite(c->A, &cv));
2397: PetscCall(MatSetOption(C, MAT_NO_OFF_PROC_ENTRIES, PETSC_TRUE));
2398: PetscCall(MatAssemblyBegin(C, MAT_FINAL_ASSEMBLY));
2399: PetscCall(MatAssemblyEnd(C, MAT_FINAL_ASSEMBLY));
2400: PetscFunctionReturn(PETSC_SUCCESS);
2401: }
2403: static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense(Mat A, Mat B, Mat C)
2404: {
2405: Mat_MatTransMultDense *abt;
2407: PetscFunctionBegin;
2408: MatCheckProduct(C, 3);
2409: PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data empty");
2410: abt = (Mat_MatTransMultDense *)C->product->data;
2411: switch (abt->alg) {
2412: case 1:
2413: PetscCall(MatMatTransposeMultNumeric_MPIDense_MPIDense_Cyclic(A, B, C));
2414: break;
2415: default:
2416: PetscCall(MatMatTransposeMultNumeric_MPIDense_MPIDense_Allgatherv(A, B, C));
2417: break;
2418: }
2419: PetscFunctionReturn(PETSC_SUCCESS);
2420: }
2422: static PetscErrorCode MatDestroy_MatMatMult_MPIDense_MPIDense(void *data)
2423: {
2424: Mat_MatMultDense *ab = (Mat_MatMultDense *)data;
2426: PetscFunctionBegin;
2427: PetscCall(MatDestroy(&ab->Ce));
2428: PetscCall(MatDestroy(&ab->Ae));
2429: PetscCall(MatDestroy(&ab->Be));
2430: PetscCall(PetscFree(ab));
2431: PetscFunctionReturn(PETSC_SUCCESS);
2432: }
2434: static PetscErrorCode MatMatMultNumeric_MPIDense_MPIDense(Mat A, Mat B, Mat C)
2435: {
2436: Mat_MatMultDense *ab;
2437: Mat_MPIDense *mdn = (Mat_MPIDense *)A->data;
2438: Mat_MPIDense *b = (Mat_MPIDense *)B->data;
2440: PetscFunctionBegin;
2441: MatCheckProduct(C, 3);
2442: PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Missing product data");
2443: ab = (Mat_MatMultDense *)C->product->data;
2444: if (ab->Ae && ab->Ce) {
2445: #if PetscDefined(HAVE_ELEMENTAL)
2446: PetscCall(MatConvert_MPIDense_Elemental(A, MATELEMENTAL, MAT_REUSE_MATRIX, &ab->Ae));
2447: PetscCall(MatConvert_MPIDense_Elemental(B, MATELEMENTAL, MAT_REUSE_MATRIX, &ab->Be));
2448: PetscCall(MatMatMultNumeric_Elemental(ab->Ae, ab->Be, ab->Ce));
2449: PetscCall(MatConvert(ab->Ce, MATMPIDENSE, MAT_REUSE_MATRIX, &C));
2450: #else
2451: SETERRQ(PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "PETSC_HAVE_ELEMENTAL not defined");
2452: #endif
2453: } else {
2454: MPI_Comm comm;
2455: const PetscScalar *read;
2456: PetscScalar *write;
2457: PetscInt lda;
2458: const PetscInt *ranges;
2459: PetscMPIInt size;
2461: if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A)); /* cannot be done during the symbolic phase because of possible calls to MatProductReplaceMats() */
2462: comm = PetscObjectComm((PetscObject)B);
2463: PetscCallMPI(MPI_Comm_size(comm, &size));
2464: PetscCall(PetscLayoutGetRanges(B->rmap, &ranges));
2465: if (ranges[1] == ranges[size]) {
2466: // optimize for the case where the B matrix is broadcast from rank 0
2467: PetscInt b_lda, be_lda;
2468: Mat b_local = b->A;
2469: Mat b_alloc = NULL;
2470: Mat be_local = ab->Be;
2471: Mat be_alloc = NULL;
2472: PetscMemType b_memtype, be_memtype;
2473: const PetscScalar *b_array = NULL;
2474: MPI_Datatype vector_type;
2475: PetscScalar *be_array = NULL;
2476: PetscMPIInt rank;
2478: PetscCallMPI(MPI_Comm_rank(comm, &rank));
2479: PetscCall(MatDenseGetLDA(be_local, &be_lda));
2480: if (be_lda != B->rmap->N) {
2481: PetscCall(MatDuplicate(be_local, MAT_DO_NOT_COPY_VALUES, &be_alloc));
2482: be_local = be_alloc;
2483: }
2485: if (rank == 0) {
2486: PetscCall(MatDenseGetLDA(b_local, &b_lda));
2487: if (b_lda != B->rmap->N) {
2488: PetscCall(MatDuplicate(b_local, MAT_DO_NOT_COPY_VALUES, &b_alloc));
2489: PetscCall(MatCopy(b_local, b_alloc, DIFFERENT_NONZERO_PATTERN));
2490: b_local = b_alloc;
2491: }
2492: }
2493: vector_type = MPIU_SCALAR;
2494: if (B->cmap->N > 1) {
2495: PetscMPIInt mpi_N;
2497: PetscCall(PetscMPIIntCast(B->cmap->N, &mpi_N));
2498: PetscCallMPI(MPI_Type_contiguous(mpi_N, MPIU_SCALAR, &vector_type));
2499: PetscCallMPI(MPI_Type_commit(&vector_type));
2500: }
2501: PetscCall(MatDenseGetArrayReadAndMemType(b_local, &b_array, &b_memtype));
2502: PetscCall(MatDenseGetArrayWriteAndMemType(be_local, &be_array, &be_memtype));
2503: PetscCall(PetscSFBcastWithMemTypeBegin(mdn->Mvctx, vector_type, b_memtype, b_array, be_memtype, be_array, MPI_REPLACE));
2504: PetscCall(PetscSFBcastEnd(mdn->Mvctx, vector_type, b_array, be_array, MPI_REPLACE));
2505: PetscCall(MatDenseRestoreArrayWriteAndMemType(be_local, &be_array));
2506: PetscCall(MatDenseRestoreArrayReadAndMemType(b_local, &b_array));
2507: if (be_local != ab->Be) PetscCall(MatCopy(be_local, ab->Be, DIFFERENT_NONZERO_PATTERN));
2508: if (B->cmap->N > 1) PetscCallMPI(MPI_Type_free(&vector_type));
2509: PetscCall(MatDestroy(&be_alloc));
2510: PetscCall(MatDestroy(&b_alloc));
2511: } else {
2512: PetscCall(MatDenseGetLDA(B, &lda));
2513: PetscCall(MatDenseGetArrayRead(B, &read));
2514: PetscCall(MatDenseGetArrayWrite(ab->Be, &write));
2515: for (PetscInt i = 0; i < C->cmap->N; ++i) {
2516: PetscCall(PetscSFBcastBegin(mdn->Mvctx, MPIU_SCALAR, read + i * lda, write + i * ab->Be->rmap->n, MPI_REPLACE));
2517: PetscCall(PetscSFBcastEnd(mdn->Mvctx, MPIU_SCALAR, read + i * lda, write + i * ab->Be->rmap->n, MPI_REPLACE));
2518: }
2519: PetscCall(MatDenseRestoreArrayWrite(ab->Be, &write));
2520: PetscCall(MatDenseRestoreArrayRead(B, &read));
2521: }
2522: PetscCall(MatMatMultNumeric_SeqDense_SeqDense(((Mat_MPIDense *)A->data)->A, ab->Be, ((Mat_MPIDense *)C->data)->A));
2523: }
2524: PetscFunctionReturn(PETSC_SUCCESS);
2525: }
2527: static PetscErrorCode MatMatMultSymbolic_MPIDense_MPIDense(Mat A, Mat B, PetscReal fill, Mat C)
2528: {
2529: Mat_Product *product = C->product;
2530: PetscInt alg;
2531: Mat_MatMultDense *ab;
2532: PetscBool flg;
2534: PetscFunctionBegin;
2535: MatCheckProduct(C, 4);
2536: PetscCheck(!C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data not empty");
2537: /* check local size of A and B */
2538: PetscCheck(A->cmap->rstart == B->rmap->rstart && A->cmap->rend == B->rmap->rend, PetscObjectComm((PetscObject)A), PETSC_ERR_ARG_SIZ, "Matrix local dimensions are incompatible, A (%" PetscInt_FMT ", %" PetscInt_FMT ") != B (%" PetscInt_FMT ", %" PetscInt_FMT ")",
2539: A->rmap->rstart, A->rmap->rend, B->rmap->rstart, B->rmap->rend);
2541: PetscCall(PetscStrcmp(product->alg, "petsc", &flg));
2542: alg = flg ? 0 : 1;
2544: /* setup C */
2545: PetscCall(MatSetSizes(C, A->rmap->n, B->cmap->n, A->rmap->N, B->cmap->N));
2546: PetscCall(MatSetType(C, MATMPIDENSE));
2547: PetscCall(MatSetUp(C));
2549: /* create data structure for reuse Cdense */
2550: PetscCall(PetscNew(&ab));
2552: switch (alg) {
2553: case 1: /* alg: "elemental" */
2554: #if PetscDefined(HAVE_ELEMENTAL)
2555: /* create elemental matrices Ae and Be */
2556: PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &ab->Ae));
2557: PetscCall(MatSetSizes(ab->Ae, PETSC_DECIDE, PETSC_DECIDE, A->rmap->N, A->cmap->N));
2558: PetscCall(MatSetType(ab->Ae, MATELEMENTAL));
2559: PetscCall(MatSetUp(ab->Ae));
2560: PetscCall(MatSetOption(ab->Ae, MAT_ROW_ORIENTED, PETSC_FALSE));
2562: PetscCall(MatCreate(PetscObjectComm((PetscObject)B), &ab->Be));
2563: PetscCall(MatSetSizes(ab->Be, PETSC_DECIDE, PETSC_DECIDE, B->rmap->N, B->cmap->N));
2564: PetscCall(MatSetType(ab->Be, MATELEMENTAL));
2565: PetscCall(MatSetUp(ab->Be));
2566: PetscCall(MatSetOption(ab->Be, MAT_ROW_ORIENTED, PETSC_FALSE));
2568: /* compute symbolic Ce = Ae*Be */
2569: PetscCall(MatCreate(PetscObjectComm((PetscObject)C), &ab->Ce));
2570: PetscCall(MatMatMultSymbolic_Elemental(ab->Ae, ab->Be, fill, ab->Ce));
2571: #else
2572: SETERRQ(PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "PETSC_HAVE_ELEMENTAL not defined");
2573: #endif
2574: break;
2575: default: /* alg: "petsc" */
2576: ab->Ae = NULL;
2577: PetscCall(MatCreateSeqDense(PETSC_COMM_SELF, A->cmap->N, B->cmap->N, NULL, &ab->Be));
2578: ab->Ce = NULL;
2579: break;
2580: }
2582: C->product->data = ab;
2583: C->product->destroy = MatDestroy_MatMatMult_MPIDense_MPIDense;
2584: C->ops->matmultnumeric = MatMatMultNumeric_MPIDense_MPIDense;
2585: PetscFunctionReturn(PETSC_SUCCESS);
2586: }
2588: static PetscErrorCode MatProductSetFromOptions_MPIDense_AB(Mat C)
2589: {
2590: Mat_Product *product = C->product;
2591: const char *algTypes[2] = {"petsc", "elemental"};
2592: PetscInt alg, nalg = PetscDefined(HAVE_ELEMENTAL) ? 2 : 1;
2593: PetscBool flg = PETSC_FALSE;
2595: PetscFunctionBegin;
2596: /* Set default algorithm */
2597: alg = 0; /* default is PETSc */
2598: PetscCall(PetscStrcmp(product->alg, "default", &flg));
2599: if (flg) PetscCall(MatProductSetAlgorithm(C, algTypes[alg]));
2601: /* Get runtime option */
2602: PetscOptionsBegin(PetscObjectComm((PetscObject)C), ((PetscObject)C)->prefix, "MatProduct_AB", "Mat");
2603: PetscCall(PetscOptionsEList("-mat_product_algorithm", "Algorithmic approach", "MatProduct_AB", algTypes, nalg, algTypes[alg], &alg, &flg));
2604: PetscOptionsEnd();
2605: if (flg) PetscCall(MatProductSetAlgorithm(C, algTypes[alg]));
2607: C->ops->matmultsymbolic = MatMatMultSymbolic_MPIDense_MPIDense;
2608: C->ops->productsymbolic = MatProductSymbolic_AB;
2609: PetscFunctionReturn(PETSC_SUCCESS);
2610: }
2612: static PetscErrorCode MatProductSetFromOptions_MPIDense_AtB(Mat C)
2613: {
2614: Mat_Product *product = C->product;
2615: Mat A = product->A, B = product->B;
2617: PetscFunctionBegin;
2618: PetscCheck(A->rmap->rstart == B->rmap->rstart && A->rmap->rend == B->rmap->rend, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Matrix local dimensions are incompatible, (%" PetscInt_FMT ", %" PetscInt_FMT ") != (%" PetscInt_FMT ",%" PetscInt_FMT ")",
2619: A->rmap->rstart, A->rmap->rend, B->rmap->rstart, B->rmap->rend);
2620: C->ops->transposematmultsymbolic = MatTransposeMatMultSymbolic_MPIDense_MPIDense;
2621: C->ops->productsymbolic = MatProductSymbolic_AtB;
2622: PetscFunctionReturn(PETSC_SUCCESS);
2623: }
2625: static PetscErrorCode MatProductSetFromOptions_MPIDense_ABt(Mat C)
2626: {
2627: Mat_Product *product = C->product;
2628: const char *algTypes[2] = {"allgatherv", "cyclic"};
2629: PetscInt alg, nalg = 2;
2630: PetscBool flg = PETSC_FALSE;
2632: PetscFunctionBegin;
2633: /* Set default algorithm */
2634: alg = 0; /* default is allgatherv */
2635: PetscCall(PetscStrcmp(product->alg, "default", &flg));
2636: if (flg) PetscCall(MatProductSetAlgorithm(C, algTypes[alg]));
2638: /* Get runtime option */
2639: if (product->api_user) {
2640: PetscOptionsBegin(PetscObjectComm((PetscObject)C), ((PetscObject)C)->prefix, "MatMatTransposeMult", "Mat");
2641: PetscCall(PetscOptionsEList("-matmattransmult_mpidense_mpidense_via", "Algorithmic approach", "MatMatTransposeMult", algTypes, nalg, algTypes[alg], &alg, &flg));
2642: PetscOptionsEnd();
2643: } else {
2644: PetscOptionsBegin(PetscObjectComm((PetscObject)C), ((PetscObject)C)->prefix, "MatProduct_ABt", "Mat");
2645: PetscCall(PetscOptionsEList("-mat_product_algorithm", "Algorithmic approach", "MatProduct_ABt", algTypes, nalg, algTypes[alg], &alg, &flg));
2646: PetscOptionsEnd();
2647: }
2648: if (flg) PetscCall(MatProductSetAlgorithm(C, algTypes[alg]));
2650: C->ops->mattransposemultsymbolic = MatMatTransposeMultSymbolic_MPIDense_MPIDense;
2651: C->ops->productsymbolic = MatProductSymbolic_ABt;
2652: PetscFunctionReturn(PETSC_SUCCESS);
2653: }
2655: static PetscErrorCode MatProductSetFromOptions_MPIDense(Mat C)
2656: {
2657: Mat_Product *product = C->product;
2659: PetscFunctionBegin;
2660: switch (product->type) {
2661: case MATPRODUCT_AB:
2662: PetscCall(MatProductSetFromOptions_MPIDense_AB(C));
2663: break;
2664: case MATPRODUCT_AtB:
2665: PetscCall(MatProductSetFromOptions_MPIDense_AtB(C));
2666: break;
2667: case MATPRODUCT_ABt:
2668: PetscCall(MatProductSetFromOptions_MPIDense_ABt(C));
2669: break;
2670: default:
2671: break;
2672: }
2673: PetscFunctionReturn(PETSC_SUCCESS);
2674: }